RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ZNF564Q8TBZ8 553 aaPredicted RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 CENPIQ92674 756 aaPredicted RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 SERPINB11Q96P15 392 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 MCEEQ96PE7 176 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 NPY6RQ99463 290 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 DESI2Q9BSY9 194 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 CNPY3Q9BT09 278 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 C1QTNF2Q9BXJ5 285 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 KCND1Q9NSA2 647 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 CTTNBP2NLQ9P2B4 639 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 MYO1AQ9UBC5 1043 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 DNMT3LQ9UJW3 386 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 FAM50BQ9Y247 325 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 USTQ9Y2C2 406 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 USP15Q9Y4E8 981 aaPredicted RBP13.05□□□□□ -0.32
COPB1-208ENST00000532088 ANAPC1Q9H1A4 1944 aa13.05□□□□□ -0.32
COPB1-208ENST00000532088 GOLGA6L9A6NEM1 432 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 MYO1FO00160 1098 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 COCHO43405 550 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 MBTPS2O43462 519 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 KCNA5P22460 613 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 SDC4P31431 198 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 GBP1P32455 592 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 MAN1A1P33908 653 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 PGFP49763 221 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 RPL7AP62424 266 aaKnown RBP13.04□□□□□ -0.32
COPB1-208ENST00000532088 NTHL1P78549 312 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 CYP4F8P98187 520 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
COPB1-208ENST00000532088 TEAD2Q15562 447 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 DCAF6Q58WW2 860 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 GPR158Q5T848 1215 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 RSRC2Q7L4I2 434 aaKnown RBP13.04□□□□□ -0.32
COPB1-208ENST00000532088 DDX42Q86XP3 938 aaKnown RBP eCLIP13.04□□□□□ -0.32
COPB1-208ENST00000532088 JOSD2Q8TAC2 188 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 ITFG1Q8TB96 612 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 SLC35G2Q8TBE7 412 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
COPB1-208ENST00000532088 RXFP2Q8WXD0 754 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 TRIM44Q96DX7 344 aaPredicted RBP13.04□□□□□ -0.32
COPB1-208ENST00000532088 TCEAL4Q96EI5 215 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
COPB1-208ENST00000532088 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 TRPV4Q9HBA0 871 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 OBP2AQ9NY56 170 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 IP6K2Q9UHH9 426 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 CDH7Q9ULB5 785 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 ARHGAP26Q9UNA1 814 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 NAALADL1Q9UQQ1 740 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 HBS1LQ9Y450 684 aaKnown RBP13.04□□□□□ -0.32
COPB1-208ENST00000532088 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
COPB1-208ENST00000532088 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
COPB1-208ENST00000532088 C2orf78A6NCI8 922 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 H3BQ06 376 aaPredicted RBP13.03□□□□□ -0.32
COPB1-208ENST00000532088 IRAK2O43187 625 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 GDF9O60383 454 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 GRAP2O75791 330 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 ABL1P00519 1130 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 CEBPBP17676 345 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 HDCP19113 662 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
COPB1-208ENST00000532088 COG7P83436 770 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 RING1Q06587 406 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 SMAD2Q15796 467 aaKnown RBP13.03□□□□□ -0.32
COPB1-208ENST00000532088 CCDC14Q49A88 953 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 C10orf120Q5SQS8 335 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 ACBD5Q5T8D3 534 aaPredicted RBP13.03□□□□□ -0.32
COPB1-208ENST00000532088 SYPL2Q5VXT5 272 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 TXNDC8Q6A555 127 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 TRNP1Q6NT89 227 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 NPAS3Q8IXF0 933 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 CMTM8Q8IZV2 173 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 ADAM32Q8TC27 787 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 EDEM1Q92611 657 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 FGF13Q92913 245 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 E2F7Q96AV8 911 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 APOL5Q9BWW9 433 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 LACRTQ9GZZ8 138 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 POMKQ9H5K3 350 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 MARCH2Q9P0N8 246 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 ANAPC7Q9UJX3 599 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 TLR6Q9Y2C9 796 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 SZT2Q5T011 3432 aa13.03□□□□□ -0.32
COPB1-208ENST00000532088 NRG2O14511 850 aaPredicted RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 LATS1O95835 1130 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 TRUB2O95900 331 aaKnown RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 IGLV3-27P01718 113 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 SLC2A3P11169 496 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 PSMA2P25787 234 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 RDXP35241 583 aaKnown RBP13.02□□□□□ -0.33
COPB1-208ENST00000532088 PCK1P35558 622 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 AVPR1AP37288 418 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 SLC1A1P43005 524 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 SULT1E1P49888 294 aa13.02□□□□□ -0.33
COPB1-208ENST00000532088 AIF1P55008 147 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms