RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 HMCESQ96FZ2 354 aa3.23□□□□□ -1.89
PATL1-202ENST00000531919 PRR11Q96HE9 360 aaPredicted RBP3.23□□□□□ -1.89
PATL1-202ENST00000531919 CCDC138Q96M89 665 aa3.23□□□□□ -1.89
PATL1-202ENST00000531919 ZNF48Q96MX3 618 aaPredicted RBP3.23□□□□□ -1.89
PATL1-202ENST00000531919 MYD88Q99836 296 aa3.23□□□□□ -1.89
PATL1-202ENST00000531919 ELAC2Q9BQ52 826 aaKnown RBP3.23□□□□□ -1.89
PATL1-202ENST00000531919 SPRTNQ9H040 489 aaPredicted RBP3.23□□□□□ -1.89
PATL1-202ENST00000531919 PCDHAC1Q9H158 963 aa3.23□□□□□ -1.89
PATL1-202ENST00000531919 NECTIN3Q9NQS3 549 aa3.23□□□□□ -1.89
PATL1-202ENST00000531919 ABHD10Q9NUJ1 306 aa3.23□□□□□ -1.89
PATL1-202ENST00000531919 ELOVL5Q9NYP7 299 aa3.23□□□□□ -1.89
PATL1-202ENST00000531919 CA14Q9ULX7 337 aa3.23□□□□□ -1.89
PATL1-202ENST00000531919 TTC34A8MYJ7 566 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 ZSCAN9O15535 394 aaPredicted RBP3.22□□□□□ -1.89
PATL1-202ENST00000531919 DHHO43323 396 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 TLR2O60603 784 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 PLA2G6O60733 806 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 USP12O75317 370 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 NDST3O95803 873 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 CD63P08962 238 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 TMEM191BP0C7N4 346 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 CTSAP10619 480 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 HARSP12081 509 aaKnown RBP3.22□□□□□ -1.89
PATL1-202ENST00000531919 MATN1P21941 496 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 THBS4P35443 961 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 IL6STP40189 918 aaPredicted RBP3.22□□□□□ -1.89
PATL1-202ENST00000531919 NR4A2P43354 598 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 WDR5P61964 334 aaKnown RBP3.22□□□□□ -1.89
PATL1-202ENST00000531919 ID2Q02363 134 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 SRSF1Q07955 248 aaKnown RBP eCLIP3.22□□□□□ -1.89
PATL1-202ENST00000531919 RABEP1Q15276 862 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 CNGA3Q16281 694 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 MPEG1Q2M385 716 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 SLC35G1Q2M3R5 365 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 TMEM196Q5HYL7 178 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 DGKKQ5KSL6 1271 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 XRRA1Q6P2D8 792 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 FAM186BQ8IYM0 893 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 TXLNBQ8N3L3 684 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 NANOGP1Q8N7R0 232 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 GLIS1Q8NBF1 620 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 DEPTORQ8TB45 409 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 TRNAU1APQ9NX07 287 aaKnown RBP3.22□□□□□ -1.89
PATL1-202ENST00000531919 RGL1Q9NZL6 768 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 SIRT4Q9Y6E7 314 aaPredicted RBP3.22□□□□□ -1.89
PATL1-202ENST00000531919 ZMYM2Q9UBW7 1377 aa3.22□□□□□ -1.89
PATL1-202ENST00000531919 SPATA31A5Q5VU36 1347 aa3.21□□□□□ -1.89
PATL1-202ENST00000531919 SPATA31A7Q8IWB4 1347 aa3.21□□□□□ -1.89
PATL1-202ENST00000531919 C16orf96A6NNT2 1141 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 SOCS2O14508 198 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 INPPL1O15357 1258 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 BMP15O95972 392 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 VIPP01282 170 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 IGKV2-30P06310 120 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 YY1P25490 414 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 HOXD9P28356 352 aaPredicted RBP3.21□□□□□ -1.9
PATL1-202ENST00000531919 HOXD12P35452 270 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 IGHMBP2P38935 993 aaKnown RBP3.21□□□□□ -1.9
PATL1-202ENST00000531919 HSPA7P48741 367 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 RHBDL3P58872 404 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 YPEL5P62699 121 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 RAE1P78406 368 aaKnown RBP3.21□□□□□ -1.9
PATL1-202ENST00000531919 NSUN2Q08J23 767 aaKnown RBP eCLIP3.21□□□□□ -1.9
PATL1-202ENST00000531919 SEMA3BQ13214 749 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 STIM1Q13586 685 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 RBMS2Q15434 407 aaKnown RBP3.21□□□□□ -1.9
PATL1-202ENST00000531919 ARL6IP4Q66PJ3 421 aaKnown RBP3.21□□□□□ -1.9
PATL1-202ENST00000531919 CCDC144NLQ6NUI1 221 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 ACSM6Q6P461 480 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 MORC1Q86VD1 984 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 SAMD3Q8N6K7 520 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 OR52L2PQ8NGH6 319 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 GLMPQ8WWB7 406 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 GRAMD1AQ96CP6 724 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 C18orf8Q96DM3 657 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 GATA5Q9BWX5 397 aaPredicted RBP3.21□□□□□ -1.9
PATL1-202ENST00000531919 AGO4Q9HCK5 861 aaKnown RBP3.21□□□□□ -1.9
PATL1-202ENST00000531919 NLRC4Q9NPP4 1024 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 HELLSQ9NRZ9 838 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 TM7SF3Q9NS93 570 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 ARL8BQ9NVJ2 186 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 MTMR4Q9NYA4 1195 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 AFG3L2Q9Y4W6 797 aa3.21□□□□□ -1.9
PATL1-202ENST00000531919 HEMK1Q9Y5R4 338 aaPredicted RBP3.21□□□□□ -1.9
PATL1-202ENST00000531919 LY6G6EA0A0G2JKS1 128 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 FAM234BA2RU67 622 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 RRHO14718 337 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 NTSR2O95665 410 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 GLP2RO95838 553 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 PLAUP00749 431 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 PECAM1P16284 738 aaPredicted RBP3.2□□□□□ -1.9
PATL1-202ENST00000531919 ABCB4P21439 1286 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 DRD1P21728 446 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 EEF1GP26641 437 aaKnown RBP3.2□□□□□ -1.9
PATL1-202ENST00000531919 GSTM5P46439 218 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 ZNF91Q05481 1191 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 BFSP2Q13515 415 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 KPNB1Q14974 876 aaKnown RBP3.2□□□□□ -1.9
PATL1-202ENST00000531919 SLC9C1Q4G0N8 1177 aa3.2□□□□□ -1.9
PATL1-202ENST00000531919 SHC4Q6S5L8 630 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms