RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 UBR7Q8N806 425 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 NELFBQ8WX92 580 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 P2RY11Q96G91 374 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 ABCC13Q9NSE7 274 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 HBS1LQ9Y450 684 aaKnown RBP23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 STON1Q9Y6Q2 735 aa23.3■■□□□ 1.32
TRAPPC4-210ENST00000531290 CDX4O14627 284 aaPredicted RBP23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 P4HA2O15460 535 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 LCP1P13796 627 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 ITPKAP23677 461 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 HOXD12P35452 270 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 GEN1Q17RS7 908 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 UAP1L1Q3KQV9 507 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 TTI2Q6NXR4 508 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 BHLHA9Q7RTU4 235 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 EDEM1Q92611 657 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 SLC2A11Q9BYW1 496 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 CD248Q9HCU0 757 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 CNGB3Q9NQW8 809 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 CHMP5Q9NZZ3 219 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 PILRBQ9UKJ0 227 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 CYP8B1Q9UNU6 501 aa23.29■■□□□ 1.32
TRAPPC4-210ENST00000531290 IGHV1OR15-9A0A0B4J2B8 117 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 YJEFN3A6XGL0 299 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 PPP1R3GB7ZBB8 358 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 E7ENQ6 273 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 NOVA1P51513 510 aaKnown RBP23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 ZNF132P52740 706 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 ZNF33AQ06730 810 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 STILQ15468 1287 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 CNGA2Q16280 664 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 MPPE1Q53F39 396 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 FOXR2Q6PJQ5 311 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 KIAA1324Q6UXG2 1013 aaKnown RBP23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 ANKS1BQ7Z6G8 1248 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 CEP76Q8TAP6 659 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 TFAP2BQ92481 460 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 MRGPRX1Q96LB2 322 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 ELOVL2Q9NXB9 296 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 SFMBT1Q9UHJ3 866 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 ANGPTL2Q9UKU9 493 aa23.28■■□□□ 1.32
TRAPPC4-210ENST00000531290 RALGAPA1Q6GYQ0 2036 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 BIN1O00499 593 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 SYNCRIPO60506 623 aaKnown RBP23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 NDUFS2O75306 463 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 GNA14O95837 355 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 CFIP05156 583 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 MAPK8P45983 427 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 DUOXA1Q1HG43 343 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 PKDCCQ504Y2 493 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 SLC23A3Q6PIS1 610 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 SLC35F5Q8WV83 523 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 PIWIL1Q96J94 861 aaKnown RBP23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 CIPCQ9C0C6 399 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 SLC6A17Q9H1V8 727 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 THAP10Q9P2Z0 257 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 SLC6A14Q9UN76 642 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 CTNND2Q9UQB3 1225 aa23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 ATXN2Q99700 1313 aaKnown RBP23.27■■□□□ 1.32
TRAPPC4-210ENST00000531290 TIMM44O43615 452 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 TSPAN3O60637 253 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 ENGP17813 658 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 BMP6P22004 513 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 PMLP29590 882 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 RGS7P49802 495 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 ATXN3P54252 364 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 DAOAP59103 153 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 ZNF445P59923 1031 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 ARID5AQ03989 594 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 MORC3Q14149 939 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 EIF4HQ15056 248 aaKnown RBP23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 SH3PXD2AQ5TCZ1 1133 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 RRAGAQ7L523 313 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 RABEPKQ7Z6M1 372 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 FAM217AQ8IXS0 508 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 SCML4Q8N228 414 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 EHBP1Q8NDI1 1231 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 GOLGA1Q92805 767 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 TMA16Q96EY4 203 aaKnown RBP23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 PRDM16Q9HAZ2 1276 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 CLEC4EQ9ULY5 219 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 SPAG17Q6Q759 2223 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 KIAA1549LQ6ZVL6 1849 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 MYO16Q9Y6X6 1858 aa23.26■■□□□ 1.31
TRAPPC4-210ENST00000531290 EML5Q05BV3 1969 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 MYOFQ9NZM1 2061 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 M0QYV0 167 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 RNF225M0QZC1 329 aaPredicted RBP23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 IL12RB1P42701 662 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 GFPT1Q06210 699 aaPredicted RBP23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 FUT11Q495W5 492 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 ADGRF1Q5T601 910 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 PEAR1Q5VY43 1037 aaPredicted RBP23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 PMF1Q6P1K2 205 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 TRIML1Q8N9V2 468 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 RBBP8NLQ8NC74 664 aaPredicted RBP23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 LMO3Q8TAP4 145 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 IRGQQ8WZA9 623 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 KAT5Q92993 513 aa23.25■■□□□ 1.31
TRAPPC4-210ENST00000531290 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms