RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 PARD3BQ8TEW8 1205 aa9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 TOE1Q96GM8 510 aaKnown RBP9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 C7orf25Q9BPX7 421 aa9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 SCAND2PQ9GZW5 306 aaPredicted RBP9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 NACA2Q9H009 215 aa9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 CLMPQ9H6B4 373 aa9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 GDPD2Q9HCC8 539 aa9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 SLC39A2Q9NP94 309 aa9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 ITM2CQ9NQX7 267 aa9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 COMMD8Q9NX08 183 aa9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 ATMQ13315 3056 aa9.69□□□□□ -0.86
CHMP4A-205ENST00000531158 ATP8B3O60423 1300 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 GFRA2O00451 464 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 ATXN7O15265 892 aaPredicted RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 IGLV3-19P01714 112 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 SYPP08247 313 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 NCAM1P13591 858 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 PRKCHP24723 683 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 ADORA2BP29275 332 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 ATP5C1P36542 298 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 TPMTP51580 245 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 DNM1Q05193 864 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 BIRC3Q13489 604 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 CUL4BQ13620 913 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 HNRNPDQ14103 355 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 ZACNQ401N2 412 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 TMEM215Q68D42 235 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 ATL3Q6DD88 541 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 DBX2Q6ZNG2 339 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 UNC13DQ70J99 1090 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 METTL3Q86U44 580 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 CACUL1Q86Y37 369 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 GRAMD1CQ8IYS0 662 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 KIAA0895Q8NCT3 520 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 JAKMIP2Q96AA8 810 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 PIWIL1Q96J94 861 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 TNIP3Q96KP6 325 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 XPO6Q96QU8 1125 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 FUCA2Q9BTY2 467 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 GPR174Q9BXC1 333 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 ZSCAN16Q9H4T2 348 aaPredicted RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 FAM124BQ9H5Z6 455 aaPredicted RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 PRDM16Q9HAZ2 1276 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 TLR8Q9NR97 1041 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 DMAC2Q9NW81 257 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 WDR35Q9P2L0 1181 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 SCML2Q9UQR0 700 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 BTBD3Q9Y2F9 522 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 SLC27A6Q9Y2P4 619 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 MYO18BQ8IUG5 2567 aa9.68□□□□□ -0.86
CHMP4A-205ENST00000531158 ZNF462Q96JM2 2506 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 A0A1B0GTW7 788 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 KLRC4O43908 158 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 ZNF500O60304 480 aaPredicted RBP9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 EXOC3O60645 756 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 PHACTR2O75167 634 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 NDUFS2O75306 463 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 CILPO75339 1184 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 ASS1P00966 412 aaKnown RBP9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 ATXN1LP0C7T5 689 aaKnown RBP9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 RARGP13631 454 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 SNRPFP62306 86 aaKnown RBP9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 INCA1Q0VD86 236 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 STK4Q13043 487 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 CAMK2BQ13554 666 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 KNOP1Q1ED39 458 aaKnown RBP9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 PREPLQ4J6C6 727 aaPredicted RBP9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 DCAF12L1Q5VU92 463 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 SDE2Q6IQ49 451 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 KLHDC10Q6PID8 442 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 SORCS1Q8WY21 1168 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 FOXJ1Q92949 421 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 CUEDC2Q9H467 287 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 FBXO44Q9H4M3 255 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 APOBEC3GQ9HC16 384 aaKnown RBP9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.67□□□□□ -0.865e-8■■■■■ 141.5
CHMP4A-205ENST00000531158 THAP10Q9P2Z0 257 aaPredicted RBP9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 SUSD2Q9UGT4 822 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 ZKSCAN5Q9Y2L8 839 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 NFE2L3Q9Y4A8 694 aa9.67□□□□□ -0.86
CHMP4A-205ENST00000531158 USP9XQ93008 2570 aaPredicted RBP9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 METTL12A8MUP2 240 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 MEI4A8MW99 385 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 SPTLC2O15270 562 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 PPP6R2O75170 966 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 FAM200BP0CF97 657 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 KIF11P52732 1056 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 TERF1P54274 439 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 ZNF234Q14588 700 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 STK38Q15208 465 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 HLA-BQ31612 363 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 KCNT1Q5JUK3 1230 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 WDR45BQ5MNZ6 344 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 C10orf120Q5SQS8 335 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 SYCP2LQ5T4T6 812 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 LAYNQ6UX15 382 aa9.66□□□□□ -0.86
CHMP4A-205ENST00000531158 NUDT18Q6ZVK8 323 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms