RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 HMBSP08397 361 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 FECHP22830 423 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 BRD2P25440 801 aaKnown RBP11.48□□□□□ -0.57
CAPN1-221ENST00000531068 CORO1AP31146 461 aaKnown RBP11.48□□□□□ -0.57
CAPN1-221ENST00000531068 TIE1P35590 1138 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 KIR2DL1P43626 348 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-221ENST00000531068 ID4P47928 161 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 DGKGP49619 791 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 RGS7P49802 495 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 DAOAP59103 153 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 ARHGAP8P85298 464 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 LMNB2Q03252 620 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 KDSRQ06136 332 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 SRSF5Q13243 272 aaKnown RBP11.48□□□□□ -0.57
CAPN1-221ENST00000531068 LPAL2Q16609 132 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 USP39Q53GS9 565 aaKnown RBP11.48□□□□□ -0.57
CAPN1-221ENST00000531068 C10orf76Q5T2E6 689 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 SPECC1LQ69YQ0 1117 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 SDE2Q6IQ49 451 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 TMC6Q7Z403 805 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 PHTF2Q8N3S3 785 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 TERB1Q8NA31 727 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 IL17RCQ8NAC3 791 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 TXNDC5Q8NBS9 432 aaKnown RBP11.48□□□□□ -0.57
CAPN1-221ENST00000531068 ANKRD20A12PQ8NF67 263 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 NDRG1Q92597 394 aaKnown RBP11.48□□□□□ -0.57
CAPN1-221ENST00000531068 KREMEN1Q96MU8 473 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 ZNF830Q96NB3 372 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-221ENST00000531068 ZSWIM1Q9BR11 485 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 CRACR2AQ9BSW2 395 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 TRIM62Q9BVG3 475 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 AGO1Q9UL18 857 aaKnown RBP11.48□□□□□ -0.57
CAPN1-221ENST00000531068 PYCARDQ9ULZ3 195 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 STARD13Q9Y3M8 1113 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 PAXBP1Q9Y5B6 917 aa11.48□□□□□ -0.57
CAPN1-221ENST00000531068 CACNA1IQ9P0X4 2223 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 CCP110O43303 1012 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 KLF8O95600 359 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-221ENST00000531068 PENKP01210 267 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-221ENST00000531068 GYPCP04921 128 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 SLC9A1P19634 815 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 USP8P40818 1118 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 GPD2P43304 727 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 UBXN1Q04323 297 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 BYSLQ13895 437 aaKnown RBP11.47□□□□□ -0.57
CAPN1-221ENST00000531068 TRIP4Q15650 581 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-221ENST00000531068 ELF2Q15723 593 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 FILIP1LQ4L180 1135 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 FIGNQ5HY92 759 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 EMC10Q5UCC4 262 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 BHLHA9Q7RTU4 235 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 RASSF3Q86WH2 238 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 TMEM139Q8IV31 216 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 DENND1CQ8IV53 801 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 FMNL3Q8IVF7 1028 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 CPXM2Q8N436 756 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 FAM160A2Q8N612 972 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-221ENST00000531068 ALLCQ8N6M5 410 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 ZNF513Q8N8E2 541 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-221ENST00000531068 TC2NQ8N9U0 490 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 CCDC112Q8NEF3 446 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 ZNF606Q8WXB4 792 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 EDEM1Q92611 657 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 ZC3H10Q96K80 434 aaKnown RBP11.47□□□□□ -0.57
CAPN1-221ENST00000531068 POLR3BQ9NW08 1133 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-221ENST00000531068 APEX2Q9UBZ4 518 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 FBXO10Q9UK96 956 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
CAPN1-221ENST00000531068 EPHB6O15197 1021 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 THAP12O43422 761 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 TIMM44O43615 452 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 LATS1O95835 1130 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 LTFP02788 710 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 CISD3P0C7P0 127 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 PON1P27169 355 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 NTSR1P30989 418 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 HOXC13P31276 330 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 RPL34P49207 117 aaKnown RBP11.46□□□□□ -0.57
CAPN1-221ENST00000531068 KLK7P49862 253 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 SNX16P57768 344 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 BPIFB4P59827 614 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 FOXK2Q01167 660 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 PTK2Q05397 1052 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 MESP2Q0VG99 397 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 SYCP1Q15431 976 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 CSRP2Q16527 193 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 MPPE1Q53F39 396 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 ANO7Q6IWH7 933 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 BEND5Q7L4P6 421 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 SLC2A11Q9BYW1 496 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 IRX2Q9BZI1 471 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-221ENST00000531068 SIX2Q9NPC8 291 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 ST7Q9NRC1 585 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 SEMA4GQ9NTN9 838 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 SFMBT1Q9UHJ3 866 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 SLC27A6Q9Y2P4 619 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 PCDHGA5Q9Y5G8 931 aa11.46□□□□□ -0.57
CAPN1-221ENST00000531068 RIF1Q5UIP0 2472 aaKnown RBP11.46□□□□□ -0.58
CAPN1-221ENST00000531068 COL4A2P08572 1712 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms