RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 C12orf50Q8NA57 414 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 IRGQQ8WZA9 623 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 SFXN1Q9H9B4 322 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 EPB41L5Q9HCM4 733 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 IL37Q9NZH6 218 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 STAP1Q9ULZ2 295 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 NAALADL1Q9UQQ1 740 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ASB3Q9Y575 518 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 USP3Q9Y6I4 520 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CCDC195A0A1B0GUA6 201 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 RTN3O95197 1032 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 PAPLNO95428 1278 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 LTFP02788 710 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 HMGA1P17096 107 aaKnown RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 COILP38432 576 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 FNTAP49354 379 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 IFRD2Q12894 506 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 KCTD19Q17RG1 926 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 BOLA3Q53S33 107 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 SYPL2Q5VXT5 272 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ANKRD54Q6NXT1 300 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 TMCO3Q6UWJ1 677 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 IFT20Q8IY31 132 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ELMOD1Q8N336 334 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 C12orf76Q8N812 135 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 TEKT4Q8WW24 435 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ATG4AQ8WYN0 398 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ZNF707Q96C28 371 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 MYRFLQ96LU7 910 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ZNF512Q96ME7 567 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 RUNDC3BQ96NL0 473 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 TTLL2Q9BWV7 592 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CALN1Q9BXU9 219 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 PRKD2Q9BZL6 878 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 FBXO44Q9H4M3 255 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 LRRC19Q9H756 370 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 GDF3Q9NR23 364 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 COMMD8Q9NX08 183 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CLDND1Q9NY35 253 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 CALCOCO1Q9P1Z2 691 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 PCYOX1Q9UHG3 505 aa14.98□□□□□ -0.01
TTC39A-216ENST00000530004 MAGED2Q9UNF1 606 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 R3HDM2Q9Y2K5 976 aaKnown RBP14.98□□□□□ -0.01
TTC39A-216ENST00000530004 ESYT3A0FGR9 886 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 FAM92AA1XBS5 289 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 SEC31AO94979 1220 aaKnown RBP14.97□□□□□ -0.01
TTC39A-216ENST00000530004 POU2F2P09086 479 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 CDH6P55285 790 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 PITX1P78337 314 aaPredicted RBP14.97□□□□□ -0.01
TTC39A-216ENST00000530004 SNX1Q13596 522 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 KRT81Q14533 505 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 TAF12Q16514 161 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 TAZQ16635 292 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 OTUD1Q5VV17 481 aaPredicted RBP14.97□□□□□ -0.01
TTC39A-216ENST00000530004 CCNI2Q6ZMN8 369 aaPredicted RBP14.97□□□□□ -0.01
TTC39A-216ENST00000530004 GSPT2Q8IYD1 628 aaKnown RBP14.97□□□□□ -0.01
TTC39A-216ENST00000530004 CCDC105Q8IYK2 499 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 SCML4Q8N228 414 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 HNRNPLLQ8WVV9 542 aaKnown RBP14.97□□□□□ -0.01
TTC39A-216ENST00000530004 NT5C3BQ969T7 300 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 PABPC5Q96DU9 382 aaKnown RBP14.97□□□□□ -0.01
TTC39A-216ENST00000530004 NPY6RQ99463 290 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 SNRNP25Q9BV90 132 aaKnown RBP14.97□□□□□ -0.01
TTC39A-216ENST00000530004 DCLK3Q9C098 648 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 ARFGAP3Q9NP61 516 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 HOMER3Q9NSC5 361 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 GPATCH2LQ9NWQ4 482 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 CLEC1BQ9P126 229 aa14.97□□□□□ -0.01
TTC39A-216ENST00000530004 M0QYT0 321 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 XYLBO75191 536 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 TBX10O75333 385 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 MYBL2P10244 700 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 NCAM1P13591 858 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 HOXB8P17481 243 aaPredicted RBP14.96□□□□□ -0.01
TTC39A-216ENST00000530004 YWHAQP27348 245 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 PTGIRP43119 386 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 KCNJ1P48048 391 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 ARSEP51690 589 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 DLX2Q07687 328 aaPredicted RBP14.96□□□□□ -0.01
TTC39A-216ENST00000530004 ZC3H12AQ5D1E8 599 aaKnown RBP14.96□□□□□ -0.01
TTC39A-216ENST00000530004 SYCE2Q6PIF2 218 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 TMC5Q6UXY8 1006 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 BNIPLQ7Z465 357 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 CASKIN2Q8WXE0 1202 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 TRMT2BQ96GJ1 504 aaKnown RBP14.96□□□□□ -0.01
TTC39A-216ENST00000530004 FAM118BQ9BPY3 351 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 TRIM51Q9BSJ1 452 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 EFR3BQ9Y2G0 817 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 PATJQ8NI35 1801 aa14.96□□□□□ -0.01
TTC39A-216ENST00000530004 SYNJ2BP-COX16A0A087WUM0 186 aa14.96□□□□□ -0.02
TTC39A-216ENST00000530004 FAM187AA6NFU0 413 aa14.96□□□□□ -0.02
TTC39A-216ENST00000530004 MDM4O15151 490 aa14.96□□□□□ -0.02
TTC39A-216ENST00000530004 ENDOD1O94919 500 aa14.96□□□□□ -0.02
TTC39A-216ENST00000530004 TNFRSF8P28908 595 aa14.96□□□□□ -0.02
TTC39A-216ENST00000530004 RDXP35241 583 aaKnown RBP14.96□□□□□ -0.02
TTC39A-216ENST00000530004 LTBRP36941 435 aa14.96□□□□□ -0.02
TTC39A-216ENST00000530004 DPYSL3Q14195 570 aa14.96□□□□□ -0.02
TTC39A-216ENST00000530004 CCDC85BQ15834 202 aaPredicted RBP14.96□□□□□ -0.02
TTC39A-216ENST00000530004 CCNG2Q16589 344 aa14.96□□□□□ -0.02
TTC39A-216ENST00000530004 CA9Q16790 459 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms