RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 EXOC7Q9UPT5 735 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 AK5Q9Y6K8 562 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 MUC22E2RYF6 1773 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 NUMA1Q14980 2115 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 FLNCQ14315 2725 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 METTL12A8MUP2 240 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 H3BQV1 296 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 J3QKU1 62 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 TNFSF14O43557 240 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 SYNCRIPO60506 623 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 AP1G2O75843 785 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 BEST1O76090 585 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 FSBPO95073 299 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 RTN3O95197 1032 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 LDHAP00338 332 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 EPHX1P07099 455 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CISD3P0C7P0 127 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF883P0CG24 379 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 ACADMP11310 421 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 JUPP14923 745 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 GARTP22102 1010 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 ACSL1P33121 698 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 ABCD1P33897 745 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 GRK6P43250 576 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CCT8P50990 548 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 AFF3P51826 1226 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 COPAP53621 1224 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 MAP3K7CLP57077 242 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 POU5F1Q01860 360 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CFHR1Q03591 330 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 TARDBPQ13148 414 aaKnown RBP eCLIP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 SF3A1Q15459 793 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 PTPRNQ16849 979 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 DUOXA2Q1HG44 320 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 WDR72Q3MJ13 1102 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 ARL6IP4Q66PJ3 421 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 IL27RAQ6UWB1 636 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 LRRC69Q6ZNQ3 347 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 PAQR9Q6ZVX9 377 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 DPH6Q7L8W6 267 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 TRAPPC11Q7Z392 1133 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 KCTD17Q8N5Z5 321 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 PDZD8Q8NEN9 1154 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 C1orf216Q8TAB5 229 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 KCNV2Q8TDN2 545 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 PRCCQ92733 491 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CCDC127Q96BQ5 260 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 HVCN1Q96D96 273 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 DNAJC19Q96DA6 116 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 NXPE2Q96DL1 559 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 AK8Q96MA6 479 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 STRA6Q9BX79 667 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 KLF16Q9BXK1 252 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 SEMA4CQ9C0C4 833 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CIPCQ9C0C6 399 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 DMAP1Q9NPF5 467 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.72□□□□□ -1.816e-6■■■■■ 48.1
PTPRC-213ENST00000529828 LSM7Q9UK45 103 aaKnown RBP3.72□□□□□ -1.81
PTPRC-213ENST00000529828 CLEC4EQ9ULY5 219 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 ANKRD6Q9Y2G4 727 aa3.72□□□□□ -1.81
PTPRC-213ENST00000529828 SHROOM3Q8TF72 1996 aa3.71□□□□□ -1.81
PTPRC-213ENST00000529828 A0A1W2PQH9 124 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 FAM47DPA6NHR8 397 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ZNF233A6NK53 670 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 BRINP1O60477 761 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ADH1BP00325 375 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ZDHHC11BP0C7U3 371 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 TNNI1P19237 187 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ADORA2BP29275 332 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 LONP1P36776 959 aaKnown RBP3.71□□□□□ -1.82
PTPRC-213ENST00000529828 CASP4P49662 377 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 CYP2J2P51589 502 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 MFAP3P55082 362 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 MYL6P60660 151 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ZNF234Q14588 700 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 KMT5BQ4FZB7 885 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 TAF1BQ53T94 588 aaPredicted RBP3.71□□□□□ -1.82
PTPRC-213ENST00000529828 C6orf118Q5T5N4 469 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 HES3Q5TGS1 186 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 HTR3DQ70Z44 454 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ADAT2Q7Z6V5 191 aaKnown RBP3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ACOT1Q86TX2 421 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 WDR49Q8IV35 697 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 KIAA1958Q8N8K9 716 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ZMIZ2Q8NF64 920 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 CADM4Q8NFZ8 388 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 SLC2A14Q8TDB8 520 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 CYB5D2Q8WUJ1 264 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 OVCA2Q8WZ82 227 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ZNF592Q92610 1267 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 CEP295NLQ96MC4 621 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 SLC6A18Q96N87 628 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 CLIC6Q96NY7 704 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 SMOQ99835 787 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTPRC-213ENST00000529828 PANK2Q9BZ23 570 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 SDCBP2Q9H190 292 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 NMUR1Q9HB89 426 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 ITM2CQ9NQX7 267 aa3.71□□□□□ -1.82
PTPRC-213ENST00000529828 FAM49BQ9NUQ9 324 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms