RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	ELOVL2	Q9NXB9	296 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CLIC5	Q9NZA1	410 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	AGO1	Q9UL18	857 aa	Known RBP	11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CLEC4E	Q9ULY5	219 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	MAPK8IP1	Q9UQF2	711 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SLC27A6	Q9Y2P4	619 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	USP3	Q9Y6I4	520 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SLC12A8	A0AV02	714 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	METTL12	A8MUP2	240 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PENK	P01210	267 aa	Predicted RBP	11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CYBB	P04839	570 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	HSP90AA1	P07900	732 aa	Known RBP	11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TRIM49	P0CI25	452 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TRIM49C	P0CI26	452 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	KRT13	P13646	458 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	OXTR	P30559	389 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CORO1A	P31146	461 aa	Known RBP	11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TPMT	P51580	245 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SCAP	Q12770	1279 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	DCAF12L1	Q5VU92	463 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ATL3	Q6DD88	541 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	C19orf48	Q6RUI8	117 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SLCO6A1	Q86UG4	719 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	FAM124A	Q86V42	546 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ZCCHC9	Q8N567	271 aa	Known RBP	11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CADM4	Q8NFZ8	388 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	DDI1	Q8WTU0	396 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ADAMTS14	Q8WXS8	1223 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SORCS1	Q8WY21	1168 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PRCC	Q92733	491 aa	Predicted RBP	11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PIWIL1	Q96J94	861 aa	Known RBP	11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	NUP58	Q9BVL2	599 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	DCLK3	Q9C098	648 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ZDHHC5	Q9C0B5	715 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CIPC	Q9C0C6	399 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	IL21R	Q9HBE5	538 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PNPLA8	Q9NP80	782 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	USP36	Q9P275	1121 aa	Known RBP	11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TRAF3IP3	Q9Y228	551 aa		11.93	□□□□□ -0.5
PTP4A2-211	ENST00000528840	NPC1	O15118	1278 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	BCAT2	O15382	392 aa	Predicted RBP	11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TIMM44	O43615	452 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CILP	O75339	1184 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CAPNS1	P04632	268 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	FTH1P19	P0C7X4	201 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ACADM	P11310	421 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	NR2F2	P24468	414 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ZNF132	P52740	706 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ARID5A	Q03989	594 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ADAM9	Q13443	819 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ZNF234	Q14588	700 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	INTS8	Q75QN2	995 aa	Known RBP	11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	RSRC2	Q7L4I2	434 aa	Known RBP	11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	FAM186B	Q8IYM0	893 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	NDRG1	Q92597	394 aa	Known RBP	11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	NIF3L1	Q9GZT8	377 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	GAREM1	Q9H706	876 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	MARCH2	Q9P0N8	246 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	EIF2B4	Q9UI10	523 aa	Known RBP	11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	STRIP2	Q9ULQ0	834 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	APOBEC2	Q9Y235	224 aa	Known RBP	11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PCDH15	Q96QU1	1955 aa		11.92	□□□□□ -0.5
PTP4A2-211	ENST00000528840	MAPK13	O15264	365 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TSPAN3	O60637	253 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	EPHX1	P07099	455 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PYGB	P11216	843 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PFKFB1	P16118	471 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CMA1	P23946	247 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PRKCH	P24723	683 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	RPL13	P26373	211 aa	Known RBP	11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PSMC2	P35998	433 aa	Known RBP	11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	YWHAG	P61981	247 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ENPP2	Q13822	863 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PKP1	Q13835	747 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	E2F5	Q15329	346 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	HLA-B	Q31612	363 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TMEM215	Q68D42	235 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SERPINA13P	Q6UXR4	307 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ANKS1B	Q7Z6G8	1248 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PIGZ	Q86VD9	579 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PROSER1	Q86XN7	944 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CACUL1	Q86Y37	369 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ARHGAP18	Q8N392	663 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	RHBDD1	Q8TEB9	315 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SEMA4D	Q92854	862 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TATDN2	Q93075	761 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SNX21	Q969T3	373 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CCDC47	Q96A33	483 aa	Known RBP	11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TMEM176A	Q96HP8	235 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	UBXN6	Q9BZV1	441 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TM7SF3	Q9NS93	570 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	USP25	Q9UHP3	1055 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PCOLCE2	Q9UKZ9	415 aa		11.91	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CACNA1G	O43497	2377 aa		11.9	□□□□□ -0.5
PTP4A2-211	ENST00000528840	GOLGA8CP	A6NN73	597 aa		11.9	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CBFA2T3	O75081	653 aa		11.9	□□□□□ -0.5
PTP4A2-211	ENST00000528840	MYL1	P05976	194 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms