RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 MAGEA9P43362 315 aa8□□□□□ -1.13
SOX6-211ENST00000528429 SLC11A1P49279 550 aa8□□□□□ -1.13
SOX6-211ENST00000528429 DAOAP59103 153 aa8□□□□□ -1.13
SOX6-211ENST00000528429 NNTQ13423 1086 aa8□□□□□ -1.13
SOX6-211ENST00000528429 DPYSL3Q14195 570 aa8□□□□□ -1.13
SOX6-211ENST00000528429 CTXN3Q4LDR2 81 aa8□□□□□ -1.13
SOX6-211ENST00000528429 SDHAF4Q5VUM1 108 aa8□□□□□ -1.13
SOX6-211ENST00000528429 FAM171BQ6P995 826 aa8□□□□□ -1.13
SOX6-211ENST00000528429 C1orf228Q6PIY5 440 aa8□□□□□ -1.13
SOX6-211ENST00000528429 ZDHHC24Q6UX98 284 aa8□□□□□ -1.13
SOX6-211ENST00000528429 BBS12Q6ZW61 710 aa8□□□□□ -1.13
SOX6-211ENST00000528429 TMCO2Q7Z6W1 182 aaPredicted RBP8□□□□□ -1.13
SOX6-211ENST00000528429 HOOK3Q86VS8 718 aa8□□□□□ -1.13
SOX6-211ENST00000528429 NPAS4Q8IUM7 802 aa8□□□□□ -1.13
SOX6-211ENST00000528429 GLIS1Q8NBF1 620 aa8□□□□□ -1.13
SOX6-211ENST00000528429 ARMC2Q8NEN0 867 aa8□□□□□ -1.13
SOX6-211ENST00000528429 SCAMP5Q8TAC9 235 aa8□□□□□ -1.13
SOX6-211ENST00000528429 ELAC1Q9H777 363 aaKnown RBP8□□□□□ -1.13
SOX6-211ENST00000528429 VIPAS39Q9H9C1 493 aa8□□□□□ -1.13
SOX6-211ENST00000528429 POPDC2Q9HBU9 364 aa8□□□□□ -1.13
SOX6-211ENST00000528429 PCDH18Q9HCL0 1135 aa8□□□□□ -1.13
SOX6-211ENST00000528429 TMPRSS4Q9NRS4 437 aa8□□□□□ -1.13
SOX6-211ENST00000528429 STAP1Q9ULZ2 295 aa8□□□□□ -1.13
SOX6-211ENST00000528429 AP4E1Q9UPM8 1137 aa8□□□□□ -1.13
SOX6-211ENST00000528429 PRSS47A8MTI9 375 aa8□□□□□ -1.13
SOX6-211ENST00000528429 BHMG1C9JSJ3 638 aaPredicted RBP8□□□□□ -1.13
SOX6-211ENST00000528429 DAB1O75553 588 aa8□□□□□ -1.13
SOX6-211ENST00000528429 B3GALNT1O75752 331 aa8□□□□□ -1.13
SOX6-211ENST00000528429 FBXO21O94952 628 aa8□□□□□ -1.13
SOX6-211ENST00000528429 LTFP02788 710 aa8□□□□□ -1.13
SOX6-211ENST00000528429 COL6A1P12109 1028 aa8□□□□□ -1.13
SOX6-211ENST00000528429 CD53P19397 219 aa8□□□□□ -1.13
SOX6-211ENST00000528429 HOXD11P31277 338 aaPredicted RBP8□□□□□ -1.13
SOX6-211ENST00000528429 NOS2P35228 1153 aa8□□□□□ -1.13
SOX6-211ENST00000528429 PTPN7P35236 360 aa8□□□□□ -1.13
SOX6-211ENST00000528429 SCNN1AP37088 669 aa8□□□□□ -1.13
SOX6-211ENST00000528429 VCPP55072 806 aaKnown RBP8□□□□□ -1.13
SOX6-211ENST00000528429 DEUP1Q05D60 604 aa8□□□□□ -1.13
SOX6-211ENST00000528429 MAPRE1Q15691 268 aaKnown RBP8□□□□□ -1.13
SOX6-211ENST00000528429 SLC25A52Q3SY17 297 aa8□□□□□ -1.13
SOX6-211ENST00000528429 VARS2Q5ST30 1063 aaKnown RBP8□□□□□ -1.13
SOX6-211ENST00000528429 ERMARDQ5T6L9 678 aa8□□□□□ -1.13
SOX6-211ENST00000528429 LEKR1Q6ZMV7 388 aa8□□□□□ -1.13
SOX6-211ENST00000528429 C4orf50Q6ZRC1 276 aa8□□□□□ -1.13
SOX6-211ENST00000528429 TMC3Q7Z5M5 1100 aa8□□□□□ -1.13
SOX6-211ENST00000528429 LCA5Q86VQ0 697 aa8□□□□□ -1.13
SOX6-211ENST00000528429 TMEM173Q86WV6 379 aaPredicted RBP8□□□□□ -1.13
SOX6-211ENST00000528429 PYROXD2Q8N2H3 581 aa8□□□□□ -1.13
SOX6-211ENST00000528429 CCDC33Q8N5R6 958 aa8□□□□□ -1.13
SOX6-211ENST00000528429 EIF1ADQ8N9N8 165 aaKnown RBP8□□□□□ -1.13
SOX6-211ENST00000528429 SPATA18Q8TC71 538 aa8□□□□□ -1.13
SOX6-211ENST00000528429 LRRC45Q96CN5 670 aa8□□□□□ -1.13
SOX6-211ENST00000528429 ZIM3Q96PE6 472 aa8□□□□□ -1.13
SOX6-211ENST00000528429 CRISPLD2Q9H0B8 497 aa8□□□□□ -1.13
SOX6-211ENST00000528429 CENPHQ9H3R5 247 aa8□□□□□ -1.13
SOX6-211ENST00000528429 CNGB3Q9NQW8 809 aa8□□□□□ -1.13
SOX6-211ENST00000528429 ZDHHC18Q9NUE0 388 aa8□□□□□ -1.13
SOX6-211ENST00000528429 MTRF1LQ9UGC7 380 aaKnown RBP8□□□□□ -1.13
SOX6-211ENST00000528429 TBK1Q9UHD2 729 aa8□□□□□ -1.13
SOX6-211ENST00000528429 HHLA1C9JL84 531 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 MCF2LO15068 1137 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 CPB1P15086 417 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 RDXP35241 583 aaKnown RBP7.99□□□□□ -1.13
SOX6-211ENST00000528429 HSD17B3P37058 310 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 RANBP1P43487 201 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 ARSEP51690 589 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 EIF3EP60228 445 aaKnown RBP7.99□□□□□ -1.13
SOX6-211ENST00000528429 PTK6Q13882 451 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 P3H1Q32P28 736 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 FBXO46Q6PJ61 603 aaPredicted RBP7.99□□□□□ -1.13
SOX6-211ENST00000528429 NDUFAF2Q8N183 169 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 CCDC89Q8N998 374 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 OR2W6PQ8NHA6 318 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 LRRN4Q8WUT4 740 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 GIMAP1Q8WWP7 306 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 RSAD2Q8WXG1 361 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.99□□□□□ -1.13
SOX6-211ENST00000528429 P3H4Q92791 437 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 NELL1Q92832 810 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 SLCO2A1Q92959 643 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 SNF8Q96H20 258 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 COLEC11Q9BWP8 271 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 UBXN6Q9BZV1 441 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 MMADHCQ9H3L0 296 aaPredicted RBP7.99□□□□□ -1.13
SOX6-211ENST00000528429 DDIT4Q9NX09 232 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 PSD3Q9NYI0 1048 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 ZMAT5Q9UDW3 170 aaKnown RBP7.99□□□□□ -1.13
SOX6-211ENST00000528429 PLAAQ9Y263 795 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 SF3B1O75533 1304 aaKnown RBP eCLIP7.99□□□□□ -1.131e-10■■■■■ 241.2
SOX6-211ENST00000528429 SCN5AQ14524 2016 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 H7C0C1 242 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 TMEM189-UBE2V1I3L0A0 370 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 RBP3P10745 1247 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 HSPA9P38646 679 aaKnown RBP7.99□□□□□ -1.13
SOX6-211ENST00000528429 ATP5OP48047 213 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 LBX1P52954 281 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 ITGA8P53708 1063 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 NRLP54845 237 aa7.99□□□□□ -1.13
SOX6-211ENST00000528429 DRG2P55039 364 aaKnown RBP7.99□□□□□ -1.13
SOX6-211ENST00000528429 LMNB2Q03252 620 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms