RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 A0A1W2PQY0 241 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 YJEFN3A6XGL0 299 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 E7ENQ6 273 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 EEF2KO00418 725 aaKnown RBP15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 NRP1O14786 923 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 MTSS1O43312 755 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 FKTNO75072 461 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 OAZ2O95190 189 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 INHAP05111 366 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 FYNP06241 537 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 NCAM1P13591 858 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 GOT1P17174 413 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 AMPD1P23109 780 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 HTR7P34969 479 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 BRCC3P46736 316 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 GLUD2P49448 558 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 ATXN1P54253 815 aaKnown RBP15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 YWHAHQ04917 246 aaPredicted RBP15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 BBS9Q3SYG4 887 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 FNBP1LQ5T0N5 605 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 OTUD1Q5VV17 481 aaPredicted RBP15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 SYPL2Q5VXT5 272 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 FBXO36Q8NEA4 188 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 ATXN2LQ8WWM7 1075 aaKnown RBP15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 HTR3CQ8WXA8 447 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 OLFM3Q96PB7 478 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 FAM193BQ96PV7 902 aaPredicted RBP15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 KCNK16Q96T55 309 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 CYTH2Q99418 400 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 PAAF1Q9BRP4 392 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 ADAM33Q9BZ11 813 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 OSBPL7Q9BZF2 842 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 ZMYND15Q9H091 742 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 NSRP1Q9H0G5 558 aaKnown RBP15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 XAB2Q9HCS7 855 aaKnown RBP15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 ARHGEF4Q9NR80 690 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 TMEM161AQ9NX61 479 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 NKIRAS1Q9NYS0 192 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 DTLQ9NZJ0 730 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 RABGEF1Q9UJ41 708 aa15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 SMG5Q9UPR3 1016 aaKnown RBP15.28■□□□□ 0.04
ECHDC1-220ENST00000528402 GOLGA8MH3BSY2 632 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 SYN3O14994 580 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 OPHN1O60890 802 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 TMEM63AO94886 807 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 USP17L7P0C7H9 530 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 MLNP12872 115 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 BRAFP15056 766 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 SELPP16109 830 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 IGFBP6P24592 240 aaPredicted RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 GRK4P32298 578 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 STX2P32856 288 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 CXCR3P49682 368 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 APLP1P51693 650 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 GPX6P59796 221 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 GBE1Q04446 702 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 NME3Q13232 169 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 NFE2Q16621 373 aaPredicted RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 GKAP1Q5VSY0 366 aaPredicted RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 ADGRD1Q6QNK2 874 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 RFX8Q6ZV50 586 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 YTHDF3Q7Z739 585 aaKnown RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 CPLX4Q7Z7G2 160 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 RTN4RL1Q86UN2 441 aaPredicted RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 SPATA2LQ8IUW3 424 aaPredicted RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 MDM1Q8TC05 714 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 NDRG1Q92597 394 aaKnown RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 APBB2Q92870 758 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 ALKBH8Q96BT7 664 aaKnown RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 FUBP3Q96I24 572 aaKnown RBP eCLIP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 TRPV6Q9H1D0 765 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 WDCPQ9H6R7 721 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 ETNK1Q9HBU6 452 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 WDR6Q9NNW5 1121 aaKnown RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 EIF2B3Q9NR50 452 aaKnown RBP15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 PIGVQ9NUD9 493 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 CACNG4Q9UBN1 327 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 TEX264Q9Y6I9 313 aa15.27■□□□□ 0.04
ECHDC1-220ENST00000528402 PTPRDP23468 1912 aa15.27■□□□□ 0.03
ECHDC1-220ENST00000528402 CLUHO75153 1309 aa15.27■□□□□ 0.03
ECHDC1-220ENST00000528402 A0A0A0MRY4 1105 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 TMEM120BA0PK00 339 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 RASA4BC9J798 803 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 PRPF4O43172 522 aaKnown RBP eCLIP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 HOXA2O43364 376 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 RASA4O43374 803 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 MX2P20592 715 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 BDNFP23560 247 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 GBP2P32456 591 aaPredicted RBP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 MSH2P43246 934 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 SEC24CP53992 1094 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 SLC10A2Q12908 348 aaPredicted RBP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 SEMA5AQ13591 1074 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 DPYSQ14117 519 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 FASTKD3Q14CZ7 662 aaKnown RBP15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 BRMS1LQ5PSV4 323 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 HFE2Q6ZVN8 426 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 CYS1Q717R9 158 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 LRRC8DQ7L1W4 858 aa15.26■□□□□ 0.03
ECHDC1-220ENST00000528402 TRABD2AQ86V40 505 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms