RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TOGARAM2Q6ZUX3 1019 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 RABEPKQ7Z6M1 372 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 METTL3Q86U44 580 aaKnown RBP14.84□□□□□ -0.03
CAPN1-212ENST00000527887 DENND1CQ8IV53 801 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 TRIM59Q8IWR1 403 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 EHBP1Q8NDI1 1231 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 LMO3Q8TAP4 145 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 CEP76Q8TAP6 659 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 UBA3Q8TBC4 463 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 SLC35F5Q8WV83 523 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 RLN3Q8WXF3 142 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 FAM81BQ96LP2 452 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 CD248Q9HCU0 757 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 STOML2Q9UJZ1 356 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.84□□□□□ -0.03
CAPN1-212ENST00000527887 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.84□□□□□ -0.03
CAPN1-212ENST00000527887 SPAG17Q6Q759 2223 aa14.84□□□□□ -0.03
CAPN1-212ENST00000527887 SPTBN2O15020 2390 aa14.83□□□□□ -0.03
CAPN1-212ENST00000527887 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 TULP2O00295 520 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 FBXO21O94952 628 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 AFPP02771 609 aaKnown RBP14.83□□□□□ -0.04
CAPN1-212ENST00000527887 DAOAP59103 153 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 ENPP2Q13822 863 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 STARD3Q14849 445 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 MEA1Q16626 185 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 PEAR1Q5VY43 1037 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-212ENST00000527887 LYSMD4Q5XG99 296 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 ENOSF1Q7L5Y1 443 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 ANKS1BQ7Z6G8 1248 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 FMNL3Q8IVF7 1028 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 TMEFF1Q8IYR6 380 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 ZNF557Q8N988 423 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-212ENST00000527887 DDI1Q8WTU0 396 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 PIGKQ92643 395 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 GOLGA1Q92805 767 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 NUSAP1Q9BXS6 441 aaKnown RBP14.83□□□□□ -0.04
CAPN1-212ENST00000527887 SMOC1Q9H4F8 434 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 ZDHHC4Q9NPG8 344 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 TMEM9BQ9NQ34 198 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 PLK2Q9NYY3 685 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 THAP10Q9P2Z0 257 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-212ENST00000527887 MBD1Q9UIS9 605 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-212ENST00000527887 CNTN6Q9UQ52 1028 aa14.83□□□□□ -0.04
CAPN1-212ENST00000527887 LNP1A1A4G5 178 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 YJEFN3A6XGL0 299 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 E7ENQ6 273 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 SART1O43290 800 aaKnown RBP14.82□□□□□ -0.04
CAPN1-212ENST00000527887 WASP42768 502 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 MPP7Q5T2T1 576 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 ADGRF1Q5T601 910 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 TCEAL6Q6IPX3 200 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 MSANTD2Q6P1R3 559 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 SLC23A3Q6PIS1 610 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 UNC45BQ8IWX7 931 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 TFAP2BQ92481 460 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 BHMTQ93088 406 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 TCEAL3Q969E4 200 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 AZIN2Q96A70 460 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 PIWIL1Q96J94 861 aaKnown RBP14.82□□□□□ -0.04
CAPN1-212ENST00000527887 ACOX2Q99424 681 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 SRRTQ9BXP5 876 aaKnown RBP14.82□□□□□ -0.04
CAPN1-212ENST00000527887 ELOVL2Q9NXB9 296 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 CALCOCO1Q9P1Z2 691 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 CTNND2Q9UQB3 1225 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 STON1Q9Y6Q2 735 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 KIAA1549LQ6ZVL6 1849 aa14.82□□□□□ -0.04
CAPN1-212ENST00000527887 MYO16Q9Y6X6 1858 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 IGHV1OR15-9A0A0B4J2B8 117 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 C4orf47A7E2U8 309 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 RNF225M0QZC1 329 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-212ENST00000527887 IRAK2O43187 625 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 GADD45BO75293 160 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-212ENST00000527887 LCP1P13796 627 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 NDUFV2P19404 249 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 PTGER3P43115 390 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 ACADSBP45954 432 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 RPL6Q02878 288 aaKnown RBP14.81□□□□□ -0.04
CAPN1-212ENST00000527887 RING1Q06587 406 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 GEN1Q17RS7 908 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 DUOXA1Q1HG43 343 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 TRIM61Q5EBN2 209 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 NUGGCQ68CJ6 796 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 PMF1Q6P1K2 205 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 BEND5Q7L4P6 421 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 RBBP8NLQ8NC74 664 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-212ENST00000527887 WFIKKN2Q8TEU8 576 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 STK32AQ8WU08 396 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 NDRG1Q92597 394 aaKnown RBP14.81□□□□□ -0.04
CAPN1-212ENST00000527887 FOXJ1Q92949 421 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 TMA16Q96EY4 203 aaKnown RBP14.81□□□□□ -0.04
CAPN1-212ENST00000527887 MRGPRX1Q96LB2 322 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 TRIM62Q9BVG3 475 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 CACNA2D2Q9NY47 1150 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 KIAA1468Q9P260 1216 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 PILRBQ9UKJ0 227 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 MYH10P35580 1976 aa14.81□□□□□ -0.04
CAPN1-212ENST00000527887 RALGAPA1Q6GYQ0 2036 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 M0QYV0 167 aa14.8□□□□□ -0.04
CAPN1-212ENST00000527887 BIN1O00499 593 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms