RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 ACOX2Q99424 681 aa20.14■□□□□ 0.81
CAPN1-211ENST00000527739 STARD13Q9Y3M8 1113 aa20.14■□□□□ 0.81
CAPN1-211ENST00000527739 PCDHGA5Q9Y5G8 931 aa20.14■□□□□ 0.81
CAPN1-211ENST00000527739 MYO16Q9Y6X6 1858 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 SDK1Q7Z5N4 2213 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 MSI1O43347 362 aaKnown RBP20.13■□□□□ 0.81
CAPN1-211ENST00000527739 LETM1O95202 739 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-211ENST00000527739 PENKP01210 267 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-211ENST00000527739 ZNF806P0C7X5 589 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 CHRM1P11229 460 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-211ENST00000527739 SLC9A1P19634 815 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 BCKDHBP21953 392 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 DHPSP49366 369 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-211ENST00000527739 FYB2Q5VWT5 728 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 GBP6Q6ZN66 633 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 CLEC4CQ8WTT0 213 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 SPACA7Q96KW9 195 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 HSFY1Q96LI6 401 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 MED15Q96RN5 788 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 HCN2Q9UL51 889 aa20.13■□□□□ 0.81
CAPN1-211ENST00000527739 HBS1LQ9Y450 684 aaKnown RBP20.13■□□□□ 0.81
CAPN1-211ENST00000527739 THAP12O43422 761 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 MED7O43513 233 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 GABBR2O75899 941 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 CAVIN2O95810 425 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 LTFP02788 710 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 KCNA4P22459 653 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 ZNF132P52740 706 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 BYSLQ13895 437 aaKnown RBP20.12■□□□□ 0.81
CAPN1-211ENST00000527739 TRIP4Q15650 581 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-211ENST00000527739 DENND1BQ6P3S1 775 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 SCML4Q8N228 414 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 FRMD1Q8N878 549 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 IRGQQ8WZA9 623 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 P2RY11Q96G91 374 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 NUP62CLQ9H1M0 184 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 VPS45Q9NRW7 570 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 CACNA2D2Q9NY47 1150 aa20.12■□□□□ 0.81
CAPN1-211ENST00000527739 FBXO21O94952 628 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 APBA1Q02410 837 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 EXOC3L4Q17RC7 722 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 HSP90AA4PQ58FG1 418 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 PMS2CLQ68D20 193 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 TRIM65Q6PJ69 517 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 ARMCX6Q7L4S7 300 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 LPCAT2Q7L5N7 544 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 ENOSF1Q7L5Y1 443 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 SCUBE3Q8IX30 993 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 CPXM2Q8N436 756 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 OLIG1Q8TAK6 271 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 UCMAQ8WVF2 138 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 FAM149B1Q96BN6 582 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 FBXO10Q9UK96 956 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 RAD54BQ9Y620 910 aa20.11■□□□□ 0.81
CAPN1-211ENST00000527739 EML5Q05BV3 1969 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 BCLAF3A2AJT9 711 aaKnown RBP20.1■□□□□ 0.81
CAPN1-211ENST00000527739 WASH3PC4AMC7 463 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 PES1O00541 588 aaKnown RBP20.1■□□□□ 0.81
CAPN1-211ENST00000527739 NCAM1P13591 858 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 GABRG2P18507 467 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 GNA15P30679 374 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 P2RY2P41231 377 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 GEN1Q17RS7 908 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 MPPE1Q53F39 396 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 TCEAL6Q6IPX3 200 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 CYP2U1Q7Z449 544 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 IRF2BP1Q8IU81 584 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 FAM114A1Q8IWE2 563 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 TMEFF1Q8IYR6 380 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 IPO4Q8TEX9 1081 aaKnown RBP20.1■□□□□ 0.81
CAPN1-211ENST00000527739 TCEAL3Q969E4 200 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 TMA16Q96EY4 203 aaKnown RBP20.1■□□□□ 0.81
CAPN1-211ENST00000527739 FAM81BQ96LP2 452 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 CIPCQ9C0C6 399 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 ACP6Q9NPH0 428 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 DACH1Q9UI36 760 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 CLEC4EQ9ULY5 219 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 CNTN6Q9UQ52 1028 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 SLC27A6Q9Y2P4 619 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 CHD8Q9HCK8 2581 aa20.1■□□□□ 0.81
CAPN1-211ENST00000527739 MAP1BP46821 2468 aaKnown RBP20.09■□□□□ 0.81
CAPN1-211ENST00000527739 A0A1W2PQF6 199 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 GPD2P43304 727 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 ACADSBP45954 432 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 TBX4P57082 545 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 ARID5AQ03989 594 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 DPCR1Q3MIW9 517 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 PLA2G2CQ5R387 149 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 IL31Q6EBC2 164 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 KIAA1211LQ6NV74 962 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 DEFB119Q8N690 84 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 ZNF606Q8WXB4 792 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 PIGKQ92643 395 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 THAP9Q9H5L6 903 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 CALCOCO1Q9P1Z2 691 aa20.09■□□□□ 0.81
CAPN1-211ENST00000527739 CAPN9O14815 690 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 TM4SF5O14894 197 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 PRKCSHP14314 528 aaPredicted RBP20.08■□□□□ 0.81
CAPN1-211ENST00000527739 PON1P27169 355 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms