RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 VEPH1Q14D04 833 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 ACAP1Q15027 740 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 HADHQ16836 314 aaKnown RBP19.53■□□□□ 0.72
SMPD1-203ENST00000527275 LRIT3Q3SXY7 679 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 MFSD7Q6UXD7 560 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 CCDC149Q6ZUS6 474 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 POLNQ7Z5Q5 900 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 DNAJB7Q7Z6W7 309 aaPredicted RBP19.53■□□□□ 0.72
SMPD1-203ENST00000527275 ATG4AQ8WYN0 398 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 SLCO2A1Q92959 643 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 DDX23Q9BUQ8 820 aaKnown RBP19.53■□□□□ 0.72
SMPD1-203ENST00000527275 TTLL2Q9BWV7 592 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 OSER1Q9NX31 292 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 GMIPQ9P107 970 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 R3HDM2Q9Y2K5 976 aaKnown RBP19.53■□□□□ 0.72
SMPD1-203ENST00000527275 ATG2AQ2TAZ0 1938 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 A0A1W2PQH9 124 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 DAB1O75553 588 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 CSH1P0DML2 217 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 CSH2P0DML3 217 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 NOS2P35228 1153 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 PITX1P78337 314 aaPredicted RBP19.53■□□□□ 0.72
SMPD1-203ENST00000527275 RAB6CQ53S08 254 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 RAPGEF5Q92565 580 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 LRRC45Q96CN5 670 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 RAB6CQ9H0N0 254 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 MAN1C1Q9NR34 630 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 HCFC2Q9Y5Z7 792 aa19.53■□□□□ 0.72
SMPD1-203ENST00000527275 MTCL1Q9Y4B5 1905 aaKnown RBP19.53■□□□□ 0.72
SMPD1-203ENST00000527275 EYSQ5T1H1 3165 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 KRT7P08729 469 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 KRT10P13645 584 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 SLC25A11Q02978 314 aaKnown RBP19.52■□□□□ 0.72
SMPD1-203ENST00000527275 TAF12Q16514 161 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 CCNG2Q16589 344 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 CFAP58Q5T655 872 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 KAZNQ674X7 775 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 SPOCD1Q6ZMY3 1216 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 IQCKQ8N0W5 287 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 SLC22A17Q8WUG5 538 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 PSMG2Q969U7 264 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 MYRFLQ96LU7 910 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 TLE6Q9H808 572 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 ZWILCHQ9H900 591 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 COMMD8Q9NX08 183 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 FEZ2Q9UHY8 353 aaPredicted RBP19.52■□□□□ 0.72
SMPD1-203ENST00000527275 XIRP2A4UGR9 3374 aa19.52■□□□□ 0.72
SMPD1-203ENST00000527275 DPYSL4O14531 572 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 RNF8O76064 485 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 LRG1P02750 347 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 PTPN9P43378 593 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 RPL21P46778 160 aaKnown RBP19.51■□□□□ 0.71
SMPD1-203ENST00000527275 GABPB1Q06547 395 aaPredicted RBP19.51■□□□□ 0.71
SMPD1-203ENST00000527275 PPP1R7Q15435 360 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 SLC25A52Q3SY17 297 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 BTBD8Q5XKL5 378 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 ATL2Q8NHH9 583 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 NT5C3BQ969T7 300 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 ACSF2Q96CM8 615 aaPredicted RBP19.51■□□□□ 0.71
SMPD1-203ENST00000527275 MRPL38Q96DV4 380 aaKnown RBP19.51■□□□□ 0.71
SMPD1-203ENST00000527275 ABCC13Q9NSE7 274 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 ZDHHC18Q9NUE0 388 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 CALCOCO1Q9P1Z2 691 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 NUDT5Q9UKK9 219 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 A0A1W2PPC1 479 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 LRRD1A4D1F6 860 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 RFPL2O75678 378 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 TJP3O95049 919 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 IL1R2P27930 398 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 GBP1P32455 592 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 NRIP1P48552 1158 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 PLTPP55058 493 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 ADCY2Q08462 1091 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 ADAM32Q8TC27 787 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 FAM172AQ8WUF8 416 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 ZIM3Q96PE6 472 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 RUFY1Q96T51 708 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 TBCBQ99426 244 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 NPY6RQ99463 290 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 FMO2Q99518 471 aa19.51■□□□□ 0.71
SMPD1-203ENST00000527275 TLR8Q9NR97 1041 aaKnown RBP19.51■□□□□ 0.71
SMPD1-203ENST00000527275 C1RP00736 705 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 PTPN7P35236 360 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 PLD1Q13393 1074 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 TFDP3Q5H9I0 405 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 PPM1LQ5SGD2 360 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 GRK7Q8WTQ7 553 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 CENPIQ92674 756 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-203ENST00000527275 ZNF512Q96ME7 567 aaPredicted RBP19.5■□□□□ 0.71
SMPD1-203ENST00000527275 GRHL1Q9NZI5 618 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 VPS18Q9P253 973 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 PCSK1NQ9UHG2 260 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 STAP1Q9ULZ2 295 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 MIPP30301 263 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 CDKN2BP42772 138 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 SULT1E1P49888 294 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 ATXN1P54253 815 aaKnown RBP19.5■□□□□ 0.71
SMPD1-203ENST00000527275 HDAC4P56524 1084 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 SMTNL2Q2TAL5 461 aa19.5■□□□□ 0.71
SMPD1-203ENST00000527275 KCNT1Q5JUK3 1230 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms