RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 COG7P83436 770 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 RING1Q06587 406 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 TNK2Q07912 1038 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 NNTQ13423 1086 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 EML3Q32P44 896 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 ZC3H12AQ5D1E8 599 aaKnown RBP11.22□□□□□ -0.61
NEDD8-205ENST00000527046 TRIM68Q6AZZ1 485 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 NADSYN1Q6IA69 706 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 PPP1R2P3Q6NXS1 205 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 RHBDF2Q6PJF5 856 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 CYP4V2Q6ZWL3 525 aaPredicted RBP11.22□□□□□ -0.61
NEDD8-205ENST00000527046 MTSS1LQ765P7 747 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 VPS36Q86VN1 386 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 BBS7Q8IWZ6 715 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 FAM217AQ8IXS0 508 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 KIAA1958Q8N8K9 716 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 ACRBPQ8NEB7 543 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 RNF139Q8WU17 664 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 E2F7Q96AV8 911 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 BTBD6Q96KE9 485 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 MCEEQ96PE7 176 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 CDK5RAP1Q96SZ6 601 aaKnown RBP11.22□□□□□ -0.61
NEDD8-205ENST00000527046 KIF9Q9HAQ2 790 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 OSGEPQ9NPF4 335 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 MYO1AQ9UBC5 1043 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 AGO1Q9UL18 857 aaKnown RBP11.22□□□□□ -0.61
NEDD8-205ENST00000527046 INTUQ9ULD6 942 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 TLR6Q9Y2C9 796 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 PCDHA13Q9Y5I0 950 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 WNT6Q9Y6F9 365 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 DUSP10Q9Y6W6 482 aa11.22□□□□□ -0.61
NEDD8-205ENST00000527046 CHADO15335 359 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 PJA2O43164 708 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 CCP110O43303 1012 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 MTA2O94776 668 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 HMBSP08397 361 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 TCF4P15884 667 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 GPD1P21695 349 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 SLC6A4P31645 630 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 TBX4P57082 545 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 ATP11AP98196 1134 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 TDGQ13569 410 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 FAM133BQ5BKY9 247 aaKnown RBP11.21□□□□□ -0.61
NEDD8-205ENST00000527046 DAB2IPQ5VWQ8 1189 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 DNAJC24Q6P3W2 148 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 RSRC2Q7L4I2 434 aaKnown RBP11.21□□□□□ -0.61
NEDD8-205ENST00000527046 ZNF683Q8IZ20 524 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 MSANTD4Q8NCY6 345 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 SLC35G2Q8TBE7 412 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 FNIP1Q8TF40 1166 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 DEPDC1BQ8WUY9 529 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 OSCP1Q8WVF1 389 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 AZIN2Q96A70 460 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 PLD4Q96BZ4 506 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 ZNF830Q96NB3 372 aaPredicted RBP11.21□□□□□ -0.61
NEDD8-205ENST00000527046 PRMT1Q99873 361 aaKnown RBP11.21□□□□□ -0.61
NEDD8-205ENST00000527046 DESI2Q9BSY9 194 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 SELENOOQ9BVL4 669 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 TRMT61BQ9BVS5 477 aaKnown RBP11.21□□□□□ -0.61
NEDD8-205ENST00000527046 NUP85Q9BW27 656 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 DEF6Q9H4E7 631 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 TRPV5Q9NQA5 729 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 SLC2A4RGQ9NR83 387 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 GTSE1Q9NYZ3 720 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 MUTYHQ9UIF7 546 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 ADGRG1Q9Y653 693 aa11.21□□□□□ -0.61
NEDD8-205ENST00000527046 TICRRQ7Z2Z1 1910 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 CAPN9O14815 690 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 IRF1P10914 325 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 CORO1AP31146 461 aaKnown RBP11.2□□□□□ -0.62
NEDD8-205ENST00000527046 GDI1P31150 447 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 SULT1E1P49888 294 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 PPP2R5DQ14738 602 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 C10orf76Q5T2E6 689 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 RNF43Q68DV7 783 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
NEDD8-205ENST00000527046 STRADAQ7RTN6 431 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 TADA2BQ86TJ2 420 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 TMEM25Q86YD3 366 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 DENND1CQ8IV53 801 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 GOLGA1Q92805 767 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 SERPINB11Q96P15 392 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 PEBP4Q96S96 227 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 CNPY3Q9BT09 278 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 TRIM62Q9BVG3 475 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 EBF3Q9H4W6 596 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.2□□□□□ -0.622e-6■■■■■ 42.9
NEDD8-205ENST00000527046 DDIT4Q9NX09 232 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 RRN3Q9NYV6 651 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 CLEC4EQ9ULY5 219 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 DUSP12Q9UNI6 340 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 SORCS3Q9UPU3 1222 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 SNX10Q9Y5X0 201 aa11.2□□□□□ -0.62
NEDD8-205ENST00000527046 ACSL4O60488 711 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 IL1R2P27930 398 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 ADRA1BP35368 520 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-205ENST00000527046 ARHGAP25P42331 645 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 IRAK1P51617 712 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms