RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 PACS1Q6VY07 963 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 TLK2Q86UE8 772 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 MREGQ8N565 214 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 NXF3Q9H4D5 531 aaKnown RBP10.2□□□□□ -0.78
USP35-201ENST00000526425 CNOT10Q9H9A5 744 aaKnown RBP10.2□□□□□ -0.78
USP35-201ENST00000526425 PCYOX1Q9UHG3 505 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 E2F8A0AVK6 867 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 HOXC6P09630 235 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 IQCF3P0C7M6 154 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 EPHB2P29323 1055 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 ECHS1P30084 290 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 SSTR1P30872 391 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 OGDHQ02218 1023 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 ARHGAP1Q07960 439 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 ATP1A4Q13733 1029 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 FASTKD3Q14CZ7 662 aaKnown RBP10.2□□□□□ -0.78
USP35-201ENST00000526425 AGBL2Q5U5Z8 902 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 DSTYKQ6XUX3 929 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 FAM131BQ86XD5 332 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 PPM1NQ8N819 430 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 ELOVL4Q9GZR5 314 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 USP18Q9UMW8 372 aa10.2□□□□□ -0.78
USP35-201ENST00000526425 PPEF2O14830 753 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 RECQL4O94761 1208 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 ZBTB11O95625 1053 aaPredicted RBP10.19□□□□□ -0.78
USP35-201ENST00000526425 ASLP04424 464 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 ERBB2P04626 1255 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 PDE1BQ01064 536 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 ROR1Q01973 937 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 MBTD1Q05BQ5 628 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 GRB14Q14449 540 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 RASAL3Q86YV0 1011 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 VPS52Q8N1B4 723 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 ADAM32Q8TC27 787 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 PTPRN2Q92932 1015 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 MCUR1Q96AQ8 359 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 SLITRK1Q96PX8 696 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 CCDC68Q9H2F9 335 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 NINJ2Q9NZG7 142 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 LRCH1Q9Y2L9 728 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 TMEM191CA6NGB0 347 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 TRPA1O75762 1119 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 CYP1A1P04798 512 aaPredicted RBP10.19□□□□□ -0.78
USP35-201ENST00000526425 INHBAP08476 426 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 SMPD1P17405 629 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 GPD1P21695 349 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 FCGRTP55899 365 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 ARL4CP56559 192 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 CCNG2Q16589 344 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 C3orf62Q6ZUJ4 267 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 CROCCP2Q86T23 111 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 SIX6OS1Q8N1H7 587 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 GIPC3Q8TF64 312 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 FAM172AQ8WUF8 416 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 SOCS4Q8WXH5 440 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 KCNN1Q92952 543 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 TGS1Q96RS0 853 aaKnown RBP10.19□□□□□ -0.78
USP35-201ENST00000526425 PDP2Q9P2J9 529 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 XPO7Q9UIA9 1087 aaKnown RBP10.19□□□□□ -0.78
USP35-201ENST00000526425 GGA2Q9UJY4 613 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 TNFSF13BQ9Y275 285 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 TTC4O95801 387 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 TKTP29401 623 aaKnown RBP10.19□□□□□ -0.78
USP35-201ENST00000526425 CPT1AP50416 773 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 HPCAP84074 193 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 ZBTB17Q13105 803 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 KRT72Q14CN4 511 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 TARBP2Q15633 366 aaKnown RBP10.19□□□□□ -0.78
USP35-201ENST00000526425 SLC10A6Q3KNW5 377 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 LIN52Q52LA3 116 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 HSP90AA5PQ58FG0 334 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 DCAF6Q58WW2 860 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 GABPB2Q8TAK5 448 aaPredicted RBP10.19□□□□□ -0.78
USP35-201ENST00000526425 NPLOC4Q8TAT6 608 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 TTC17Q96AE7 1141 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 DNAI2Q9GZS0 605 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 PDZD7Q9H5P4 517 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 TRPC7Q9HCX4 862 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 DDX56Q9NY93 547 aaKnown RBP10.19□□□□□ -0.78
USP35-201ENST00000526425 DCTN4Q9UJW0 460 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 NR2E3Q9Y5X4 410 aa10.19□□□□□ -0.78
USP35-201ENST00000526425 IGKV6D-21A0A0A0MT36 114 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 RRN3P2A6NIE6 340 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 C22orf31O95567 290 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 ASMTLO95671 621 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 SNAI1O95863 264 aaPredicted RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 AGTP01019 485 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 GNL1P36915 607 aaPredicted RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 ARPP19P56211 112 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 METTL21CQ5VZV1 264 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 TRMT10CQ7L0Y3 403 aaKnown RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 ZNF467Q7Z7K2 595 aaPredicted RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 SATL1Q86VE3 508 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 PHF13Q86YI8 300 aaPredicted RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 IFNL1Q8IU54 200 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 MRPL45Q9BRJ2 306 aaKnown RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 SDCBP2Q9H190 292 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 CDHR5Q9HBB8 845 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 ZDHHC18Q9NUE0 388 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 TXNDC16Q9P2K2 825 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms