RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 FRMD8P1Q9BZ68 369 aaPredicted RBP13.33□□□□□ -0.28
KDM2A-207ENST00000526258 SMARCAD1Q9H4L7 1026 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 CDH9Q9ULB4 789 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 DUSP12Q9UNI6 340 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 PSMD13Q9UNM6 376 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 EIF3LQ9Y262 564 aaKnown RBP13.33□□□□□ -0.28
KDM2A-207ENST00000526258 PCDHB2Q9Y5E7 798 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 SAGE2PA6NJ88 616 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 MEA1Q16626 185 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 SMTNL2Q2TAL5 461 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 ANO7Q6IWH7 933 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 PGBD2Q6P3X8 592 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 GPD1LQ8N335 351 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 KLHL1Q9NR64 748 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 TOPORSQ9NS56 1045 aaPredicted RBP13.33□□□□□ -0.28
KDM2A-207ENST00000526258 VTI1BQ9UEU0 232 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 NUDT5Q9UKK9 219 aa13.33□□□□□ -0.28
KDM2A-207ENST00000526258 XDHP47989 1333 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 CLRN2A0PK11 232 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L15C9J2P7 530 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L13C9JLJ4 530 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L11C9JVI0 530 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L18D6R9N7 530 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L22D6RA61 530 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L17D6RBQ6 530 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L19D6RCP7 530 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L20D6RJB6 530 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 GABBR2O75899 941 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 GSTM1P09488 218 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L24Q0WX57 530 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 SNRNP48Q6IEG0 339 aaKnown RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 USP17L6PQ6QN14 398 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 DENND5BQ6ZUT9 1274 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 DPP9Q86TI2 863 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 TBCCD1Q9NVR7 557 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 GPRC5DQ9NZD1 345 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 PACSIN3Q9UKS6 424 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 CLCA2Q9UQC9 943 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 SSNA1O43805 119 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 CYP19A1P11511 503 aaPredicted RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 NAMPTP43490 491 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 ACADVLP49748 655 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 PCSK7Q16549 785 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 ZCCHC23Q6ZST2 131 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 SLC44A2Q8IWA5 706 aaPredicted RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 AFG1LQ8WV93 481 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 RGS18Q9NS28 235 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 ARL8BQ9NVJ2 186 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 RUVBL2Q9Y230 463 aaKnown RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 AXIN1O15169 862 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 TIMM44O43615 452 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 PON1P27169 355 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 KPNA1P52294 538 aaPredicted RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 KHDC1Q4VXA5 237 aaKnown RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 CACHD1Q5VU97 1274 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 ZNF544Q6NX49 715 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 EIF3MQ7L2H7 374 aaKnown RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 HSPBAP1Q96EW2 488 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 ZNF333Q96JL9 665 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 ZNF570Q96NI8 536 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 BTBD9Q96Q07 612 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 PDCD10Q9BUL8 212 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 ACAT2Q9BWD1 397 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 RPS6KL1Q9Y6S9 549 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 GLRBP48167 497 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 TSNQ15631 228 aaKnown RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 SYTL3Q4VX76 610 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 CENPIQ92674 756 aaPredicted RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 PIGUQ9H490 435 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 GNEQ9Y223 722 aaKnown RBP13.32□□□□□ -0.28
KDM2A-207ENST00000526258 TAF6LQ9Y6J9 622 aa13.32□□□□□ -0.28
KDM2A-207ENST00000526258 PLEKHG3A1L390 1219 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 EDF1O60869 148 aaKnown RBP13.31□□□□□ -0.28
KDM2A-207ENST00000526258 ASLP04424 464 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 NPR3P17342 541 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 AVPR1AP37288 418 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 ACAD10Q6JQN1 1059 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 CAMKK1Q8N5S9 505 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 C8orf37Q96NL8 207 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 HAT1O14929 419 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 CYP2D6P10635 497 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 ATF6P18850 670 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 STARP49675 285 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 SULT1E1P49888 294 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 BCAP31P51572 246 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 GRM4Q14833 912 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 ZIK1Q3SY52 487 aaPredicted RBP13.31□□□□□ -0.28
KDM2A-207ENST00000526258 AGAP9Q5VTM2 703 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 FAXDC2Q96IV6 333 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 UGT2B28Q9BY64 529 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 ZFYVE28Q9HCC9 887 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 ANAPC2Q9UJX6 822 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
KDM2A-207ENST00000526258 CLASP1Q7Z460 1538 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms