RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CDK4P11802 303 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 CREB1P16220 341 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 PCID2Q5JVF3 399 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 L1TD1Q5T7N2 865 aaKnown RBP4.5□□□□□ -1.69
CD44-219ENST00000525685 LRCH2Q5VUJ6 765 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 DENND2CQ68D51 928 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 MRNIPQ6NTE8 343 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 P3H2Q8IVL5 708 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 CCDC28AQ8IWP9 274 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 GLIS1Q8NBF1 620 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 RFKQ969G6 155 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 TRIM63Q969Q1 353 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 TMEM41AQ96HV5 264 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 EIF3CQ99613 913 aaKnown RBP4.5□□□□□ -1.69
CD44-219ENST00000525685 CRB3Q9BUF7 120 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 VN1R3Q9BXE9 311 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 AS3MTQ9HBK9 375 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 TM7SF3Q9NS93 570 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 RGL1Q9NZL6 768 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 STEAP1Q9UHE8 339 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 ADAM21Q9UKJ8 722 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 CAPN11Q9UMQ6 739 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 SH2B3Q9UQQ2 575 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 MYO5BQ9ULV0 1848 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 SLIT1O75093 1534 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 TMEM131LA2VDJ0 1609 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 GCOM1H8Y6P7 765 aaPredicted RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 PIP5K1BO14986 540 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 PLA2G6O60733 806 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 SKAP2O75563 359 aaPredicted RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 RBL1P28749 1068 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 EEFSECP57772 596 aaKnown RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 TIRAPP58753 221 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 ICA1Q05084 483 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 PDCD2Q16342 344 aaPredicted RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 ARHGAP15Q53QZ3 475 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 ARL6IP4Q66PJ3 421 aaKnown RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 DPY19L3Q6ZPD9 716 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 SLC29A4Q7RTT9 530 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 WDR53Q7Z5U6 358 aaPredicted RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 KRT73Q86Y46 540 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 RASAL3Q86YV0 1011 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 RASGRP3Q8IV61 690 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 IPO4Q8TEX9 1081 aaKnown RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 SOCS4Q8WXH5 440 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 FAM227BQ96M60 508 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 PRPF18Q99633 342 aaKnown RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 ARPC5LQ9BPX5 153 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 STK33Q9BYT3 514 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 WDR12Q9GZL7 423 aaKnown RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 TFCP2L1Q9NZI6 479 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 LRFN1Q9P244 771 aa4.49□□□□□ -1.69
CD44-219ENST00000525685 RGS17Q9UGC6 210 aaPredicted RBP4.49□□□□□ -1.69
CD44-219ENST00000525685 AOX1Q06278 1338 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 IQGAP1P46940 1657 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 A0A087WV62 115 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 hCG_1642624A0A1W2PR95 340 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 VIPP01282 170 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 TMEM225BP0DP42 221 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 GABRB3P28472 473 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 E2F1Q01094 437 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 NSUN2Q08J23 767 aaKnown RBP eCLIP4.48□□□□□ -1.69
CD44-219ENST00000525685 PUM3Q15397 648 aaKnown RBP4.48□□□□□ -1.69
CD44-219ENST00000525685 RAB30Q15771 203 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 MAPKAPK3Q16644 382 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 CCDC38Q502W7 563 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 RAP1GAP2Q684P5 730 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 ANKRD16Q6P6B7 361 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 PTF1AQ7RTS3 328 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 AMIGO2Q86SJ2 522 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 RP9Q8TA86 221 aaKnown RBP4.48□□□□□ -1.69
CD44-219ENST00000525685 MORC4Q8TE76 937 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 HASPINQ8TF76 798 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 TTLL2Q9BWV7 592 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 SNX15Q9NRS6 342 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 SERTAD4Q9NUC0 356 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 MGAT4CQ9UBM8 478 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 AMFRQ9UKV5 643 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 SLC27A6Q9Y2P4 619 aa4.48□□□□□ -1.69
CD44-219ENST00000525685 SCAF11Q99590 1463 aaKnown RBP4.48□□□□□ -1.69
CD44-219ENST00000525685 ZFYVE9O95405 1425 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 KIF1BO60333 1816 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 A0A087WZ62 844 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 TPD52L2O43399 206 aaKnown RBP4.47□□□□□ -1.69
CD44-219ENST00000525685 EXOC3O60645 756 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 PMPCBO75439 489 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 USP1O94782 785 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 PECAM1P16284 738 aaPredicted RBP4.47□□□□□ -1.69
CD44-219ENST00000525685 EGR1P18146 543 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 PCSK6P29122 969 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 GKP32189 559 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 GSTM5P46439 218 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 EIF4A1P60842 406 aaKnown RBP4.47□□□□□ -1.69
CD44-219ENST00000525685 TIAL1Q01085 375 aaKnown RBP eCLIP4.47□□□□□ -1.69
CD44-219ENST00000525685 BFSP2Q13515 415 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 IDI1Q13907 227 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 ST3GAL2Q16842 350 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 SLC5A9Q2M3M2 681 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 GRAMD1BQ3KR37 738 aa4.47□□□□□ -1.69
CD44-219ENST00000525685 FCRLBQ6BAA4 426 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms