RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 USP3Q9Y6I4 520 aa17.07■□□□□ 0.32
CCDC90B-203ENST00000525503 A0A0A0MRY4 1105 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 FAM159BA6NKW6 160 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 CXorf49A8MYA2 514 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 HAS3O00219 553 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 KLF11O14901 512 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 ZNF189O75820 626 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 WFS1O76024 890 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 MLNP12872 115 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 GOT1P17174 413 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 CCNFP41002 786 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 SERPINB4P48594 390 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 LILRA4P59901 499 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 PRKD1Q15139 912 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 PRAMEF19Q5SWL8 479 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 ZNF618Q5T7W0 954 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 CYS1Q717R9 158 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 PIGZQ86VD9 579 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 DEFB106AQ8N104 65 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 NME8Q8N427 588 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 TMEM40Q8WWA1 233 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 PTPRN2Q92932 1015 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 SPATA13Q96N96 652 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 TUBB6Q9BUF5 446 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 PLAC1Q9HBJ0 212 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 ALG13Q9NP73 1137 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 IPPQ9Y573 584 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 KAT6AQ92794 2004 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 SF3B1O75533 1304 aaKnown RBP eCLIP17.06■□□□□ 0.328e-6■■■■■ 107
CCDC90B-203ENST00000525503 CCND1P24385 295 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 TARSP26639 723 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 NOS2P35228 1153 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 SOX4Q06945 474 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 ADIGQ0VDE8 80 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 SPRYD7Q5W111 196 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 ZNF534Q76KX8 674 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 RFWD2Q8NHY2 731 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 PPP1R13LQ8WUF5 828 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 LRRN4Q8WUT4 740 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 KCTD13Q8WZ19 329 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 FAM149B1Q96BN6 582 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 HAO1Q9UJM8 370 aa17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 MTO1Q9Y2Z2 717 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-203ENST00000525503 ZNF236Q9UL36 1845 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 TREHO43280 583 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 MYL3P08590 195 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 GNAT1P11488 350 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 NPR3P17342 541 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 BGNP21810 368 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 CNTFP26441 200 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 TKTP29401 623 aaKnown RBP17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 MRPS5P82675 430 aaKnown RBP17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 OVGP1Q12889 678 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 MAP2K5Q13163 448 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 HIC1Q14526 733 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 E2F5Q15329 346 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 TAF1BQ53T94 588 aaPredicted RBP17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 ANKRD20A2Q5SQ80 823 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 MORN1Q5T089 497 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 ANKRD20A1Q5TYW2 823 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 ANKRD20A3Q5VUR7 823 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 MTDHQ86UE4 582 aaKnown RBP17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 OSTM1Q86WC4 334 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 FAM131BQ86XD5 332 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 TBC1D31Q96DN5 1066 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 KATNAL1Q9BW62 490 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 AP5M1Q9H0R1 490 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 GOLGA2P5Q9HBQ8 144 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 ARHGEF4Q9NR80 690 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 SMYD2Q9NRG4 433 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 DCTN4Q9UJW0 460 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 STAP1Q9ULZ2 295 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 PLLPQ9Y342 182 aa17.05■□□□□ 0.32
CCDC90B-203ENST00000525503 SCN4AP35499 1836 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 C17orf102A2RUQ5 167 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 TRAFD1O14545 582 aaPredicted RBP17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 OPHN1O60890 802 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 RFPL1O75677 317 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 PTPN1P18031 435 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 LRPAP1P30533 357 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 ARFIP2P53365 341 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 PLEKHG4Q58EX7 1191 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 DCAF6Q58WW2 860 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 FAM182AQ5T1J6 154 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 OLFML2BQ68BL8 750 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 DENND5BQ6ZUT9 1274 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 CLNKQ7Z7G1 428 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 SIX6OS1Q8N1H7 587 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 PYROXD2Q8N2H3 581 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 SMG8Q8ND04 991 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 DEPDC1BQ8WUY9 529 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 NT5C3BQ969T7 300 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 STAMBPL1Q96FJ0 436 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 PTPN18Q99952 460 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 MAGEB5Q9BZ81 275 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 LRRC4Q9HBW1 653 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 EIF2B3Q9NR50 452 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 LNPEPQ9UIQ6 1025 aa17.04■□□□□ 0.32
CCDC90B-203ENST00000525503 SRCAPQ6ZRS2 3230 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms