RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SYPL2Q5VXT5 272 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 EGFLAMQ63HQ2 1017 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 ANO7Q6IWH7 933 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 MSANTD2Q6P1R3 559 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 ZNF513Q8N8E2 541 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 ADAM32Q8TC27 787 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 DDI1Q8WTU0 396 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 STK32AQ8WU08 396 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 GAB3Q8WWW8 586 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 ACOX2Q99424 681 aa13.4□□□□□ -0.26
TRAPPC4-205ENST00000525079 EML5Q05BV3 1969 aa13.4□□□□□ -0.27
TRAPPC4-205ENST00000525079 GOLGA6L7A0A1B0GV03 622 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 PENKP01210 267 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 CYBBP04839 570 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 KRT9P35527 623 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 TBX4P57082 545 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 MEA1Q16626 185 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 EOGTQ5NDL2 527 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 LAIR1Q6GTX8 287 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 NUDT18Q6ZVK8 323 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 TMEM110Q86TL2 294 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 KBTBD6Q86V97 674 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 FAM71AQ8IYT1 594 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 CPXM2Q8N436 756 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 FAM160A2Q8N612 972 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 C1orf131Q8NDD1 294 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 DQX1Q8TE96 717 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 PIWIL1Q96J94 861 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 CPXM1Q96SM3 734 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 FBXO10Q9UK96 956 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 GMEB2Q9UKD1 530 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 PCDHGC3Q9UN70 934 aa13.39□□□□□ -0.27
TRAPPC4-205ENST00000525079 DMDP11532 3685 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 CCDC163A0A0D9SF12 145 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 CAPN9O14815 690 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 SART1O43290 800 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 TPM2P07951 284 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 UCHL3P15374 230 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 SGSHP51688 502 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 COPB1P53618 953 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 MYL5Q02045 173 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 TYRO3Q06418 890 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 SPEM2Q0P670 501 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 GEN1Q17RS7 908 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 TAF3Q5VWG9 929 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 OR6B2Q6IFH4 312 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 RFWD3Q6PCD5 774 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 TAC4Q86UU9 113 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 FAM217AQ8IXS0 508 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 MDGA1Q8NFP4 955 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 PPP1R13BQ96KQ4 1090 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 NAA15Q9BXJ9 866 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 PDCL3Q9H2J4 239 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 PARD6AQ9NPB6 346 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 EBF1Q9UH73 591 aa13.38□□□□□ -0.27
TRAPPC4-205ENST00000525079 TCRBV21S2A2A0A5A6 115 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 WASH3PC4AMC7 463 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 ACSL4O60488 711 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 GRAP2O75791 330 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 ALDH1A2O94788 518 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 MOCS2O96007 188 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 IGLV3-27P01718 113 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 ERBB2P04626 1255 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 CDK11BP21127 795 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 NTSR1P30989 418 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 SLC6A4P31645 630 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 BPIFB4P59827 614 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 POLR2FP61218 127 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 YWHAZP63104 245 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 PITX1P78337 314 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 NCAPHQ15003 741 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 HSF5Q4G112 596 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 ANO6Q4KMQ2 910 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 MPPE1Q53F39 396 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 FKBP15Q5T1M5 1219 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 ADGRF1Q5T601 910 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 FAM183BPQ6ZVS7 135 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 CACNA2D4Q7Z3S7 1137 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 RASSF3Q86WH2 238 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 UNC45BQ8IWX7 931 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 CHPFQ8IZ52 775 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 PGBD3Q8N328 593 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 AOPEPQ8N6M6 819 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 KCNV2Q8TDN2 545 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 HMGB4Q8WW32 186 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 RLN3Q8WXF3 142 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 TMA16Q96EY4 203 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 FCRL2Q96LA5 508 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 STK33Q9BYT3 514 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 GANQ9H2C0 597 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 LHX5Q9H2C1 402 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 POPDC2Q9HBU9 364 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 POLMQ9NP87 494 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 NLRC4Q9NPP4 1024 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 FAM207AQ9NSI2 230 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 CACNA2D2Q9NY47 1150 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 BCCIPQ9P287 314 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 USP18Q9UMW8 372 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms