RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ZFYVE27Q5T4F4 411 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 STXBP5Q5T5C0 1151 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 LRRC38Q5VT99 294 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 POLNQ7Z5Q5 900 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 ARL14EPQ8N8R7 260 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 ING5Q8WYH8 240 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 ZNF592Q92610 1267 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 HES6Q96HZ4 224 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 PEBP4Q96S96 227 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 RNF38Q9H0F5 515 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 TASP1Q9H6P5 420 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 WDCPQ9H6R7 721 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 WDR6Q9NNW5 1121 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 ZMYM5Q9UJ78 669 aa16.47■□□□□ 0.23
TSPAN4-213ENST00000524895 C2orf16Q68DN1 1984 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 SOBPA7XYQ1 873 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 APOEP02649 317 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 SLC2A3P11169 496 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 IL1R2P27930 398 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 AVPR1AP37288 418 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 MARCKSL1P49006 195 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 COG7P83436 770 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 PPP2R5DQ14738 602 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 SMTNL2Q2TAL5 461 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 ODF2Q5BJF6 829 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 ZC3H12AQ5D1E8 599 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 BRMS1LQ5PSV4 323 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 CCDC185Q8N715 623 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 ITFG1Q8TB96 612 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 HSPH1Q92598 858 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 KRT35Q92764 455 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 PLD4Q96BZ4 506 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 RIPOR3Q96MK2 946 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 GUCD1Q96NT3 240 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 SLC22A12Q96S37 553 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 CYP2S1Q96SQ9 504 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 TLR10Q9BXR5 811 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 SLC46A2Q9BY10 475 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.46■□□□□ 0.235e-7■■■■□ 20.5
TSPAN4-213ENST00000524895 SMPD4Q9NXE4 827 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 DDX56Q9NY93 547 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 CDH22Q9UJ99 828 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 PCDHA3Q9Y5H8 950 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 ANAPC1Q9H1A4 1944 aa16.46■□□□□ 0.23
TSPAN4-213ENST00000524895 KRT1P04264 644 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 LTBRP36941 435 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 AIF1P55008 147 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 RWDD2BP57060 319 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 SLC7A9P82251 487 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 RING1Q06587 406 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 EIF4EBP2Q13542 120 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 SKIV2LQ15477 1246 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 CCDC85BQ15834 202 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 CLUL1Q15846 466 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 BOLA3Q53S33 107 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 EFHC2Q5JST6 749 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 KCNT1Q5JUK3 1230 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 NUGGCQ68CJ6 796 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 TXNRD3NBQ6F5E7 133 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 GET4Q7L5D6 327 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 CMTM8Q8IZV2 173 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 TEKT4Q8WW24 435 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 NTAN1Q96AB6 310 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 ACSF2Q96CM8 615 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 SLC39A13Q96H72 371 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 MSLNLQ96KJ4 702 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 FCRL2Q96LA5 508 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 SNRNP25Q9BV90 132 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 TKTL2Q9H0I9 626 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 S1PR5Q9H228 398 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 KLHL11Q9NVR0 708 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 AP4E1Q9UPM8 1137 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 CPQQ9Y646 472 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 DENND4CQ5VZ89 1909 aa16.45■□□□□ 0.22
TSPAN4-213ENST00000524895 KCNK3O14649 394 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 FANCGO15287 622 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 DDX3YO15523 660 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 MOCS2O96007 188 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 IGLV3-27P01718 113 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 RARAP10276 462 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 IRF1P10914 325 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 ADRA1BP35368 520 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 MTHFRP42898 656 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 SCAPQ12770 1279 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 DNTTIP2Q5QJE6 756 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 ERMARDQ5T6L9 678 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 CYP4V2Q6ZWL3 525 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 KATNAL2Q8IYT4 538 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 ALG3Q92685 438 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 PSMB7Q99436 277 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 KLF16Q9BXK1 252 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 GPATCH2LQ9NWQ4 482 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 ARHGEF38Q9NXL2 777 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 SLC12A6Q9UHW9 1150 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 CD207Q9UJ71 328 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 FZD10Q9ULW2 581 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 SNX12Q9UMY4 172 aa16.44■□□□□ 0.22
TSPAN4-213ENST00000524895 NOTCH4Q99466 2003 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms