RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 NOS2P35228 1153 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 OPRD1P41143 372 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
VEGFA-225ENST00000523950 CDK17Q00537 523 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 TRIM14Q14142 442 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 CLEC16AQ2KHT3 1053 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 DCAF6Q58WW2 860 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 XYLT1Q86Y38 959 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 PHF13Q86YI8 300 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-225ENST00000523950 DENND1CQ8IV53 801 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 DEFB106AQ8N104 65 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 RNF214Q8ND24 703 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 SLC39A13Q96H72 371 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 PIWIL1Q96J94 861 aaKnown RBP13.08□□□□□ -0.32
VEGFA-225ENST00000523950 XPO6Q96QU8 1125 aaKnown RBP13.08□□□□□ -0.32
VEGFA-225ENST00000523950 DDX50Q9BQ39 737 aaKnown RBP13.08□□□□□ -0.32
VEGFA-225ENST00000523950 STAP1Q9ULZ2 295 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 BZW2Q9Y6E2 419 aaKnown RBP13.08□□□□□ -0.32
VEGFA-225ENST00000523950 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
VEGFA-225ENST00000523950 MSI1O43347 362 aaKnown RBP13.07□□□□□ -0.32
VEGFA-225ENST00000523950 CACNG3O60359 315 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 TRUB2O95900 331 aaKnown RBP13.07□□□□□ -0.32
VEGFA-225ENST00000523950 CYBBP04839 570 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 CALB1P05937 261 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 SLC2A3P11169 496 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 MATKP42679 507 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 SLC11A2P49281 568 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 GALK1P51570 392 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 PTPN5P54829 565 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 ZBED6P86452 979 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 EIF4EBP2Q13542 120 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-225ENST00000523950 ANO4Q32M45 955 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 FAM102AQ5T9C2 384 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-225ENST00000523950 SYPL2Q5VXT5 272 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 FSTL4Q6MZW2 842 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 SARM1Q6SZW1 724 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 TAC4Q86UU9 113 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 TMEM25Q86YD3 366 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 ETFBKMTQ8IXQ9 262 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 CPA5Q8WXQ8 436 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 PNKPQ96T60 521 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 SYT11Q9BT88 431 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 BBS2Q9BXC9 721 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 SEPT11Q9NVA2 429 aaKnown RBP13.07□□□□□ -0.32
VEGFA-225ENST00000523950 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■■■□ 22.2
VEGFA-225ENST00000523950 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.07□□□□□ -0.324e-6■□□□□ 10.5
VEGFA-225ENST00000523950 CAPN11Q9UMQ6 739 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 ZDBF2Q9HCK1 2354 aa13.07□□□□□ -0.32
VEGFA-225ENST00000523950 A0A0A0MRY4 1105 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 ACSL4O60488 711 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 ATG13O75143 517 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 PENKP01210 267 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-225ENST00000523950 APOEP02649 317 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 APODP05090 189 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 TYRP14679 529 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 TNFAIP3P21580 790 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 CCR3P51677 355 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
VEGFA-225ENST00000523950 KLHL30Q0D2K2 578 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 PPP2R5DQ14738 602 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 TAF5Q15542 800 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 MPPE1Q53F39 396 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 ADGRF1Q5T601 910 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 SPECC1LQ69YQ0 1117 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 MMS22LQ6ZRQ5 1243 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 C1orf210Q8IVY1 113 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 SPEM1Q8N4L4 309 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 ZNF557Q8N988 423 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-225ENST00000523950 PGAP3Q96FM1 320 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-225ENST00000523950 VCPIP1Q96JH7 1222 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 FCRL2Q96LA5 508 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-225ENST00000523950 PCDHB18PQ96TA0 734 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 NPY6RQ99463 290 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 FAM204AQ9H8W3 233 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 SPATA6Q9NWH7 488 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-225ENST00000523950 ADAM22Q9P0K1 906 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 DEC1Q9P2X7 70 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 SLC12A6Q9UHW9 1150 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 FBXO4Q9UKT5 387 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 LUC7L2Q9Y383 392 aaKnown RBP13.06□□□□□ -0.32
VEGFA-225ENST00000523950 PAXBP1Q9Y5B6 917 aa13.06□□□□□ -0.32
VEGFA-225ENST00000523950 CHURC1-FNTBB4DL54 471 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 NEDD8-MDP1E9PL57 170 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 GFRA2O00451 464 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 LAMTOR5O43504 91 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 TULP3O75386 442 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 GRAP2O75791 330 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 F9P00740 461 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 EGFP01133 1207 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 GYPCP04921 128 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 TPM1P09493 284 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 GZMAP12544 262 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 CCR1P32246 355 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 GRIA2P42262 883 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 PTP4A2Q12974 167 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 HSF5Q4G112 596 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-225ENST00000523950 MPP7Q5T2T1 576 aa13.05□□□□□ -0.32
VEGFA-225ENST00000523950 ACBD5Q5T8D3 534 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-225ENST00000523950 FYB2Q5VWT5 728 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms