RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 RPP40O75818 363 aaKnown RBP4.39□□□□□ -1.71
PCM1-220ENST00000523896 PDE8BO95263 885 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 MMP8P22894 467 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 CST5P28325 142 aaPredicted RBP4.39□□□□□ -1.71
PCM1-220ENST00000523896 CDK7P50613 346 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 TXNL4AP83876 142 aaKnown RBP4.39□□□□□ -1.71
PCM1-220ENST00000523896 SEMA3BQ13214 749 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 BTBD16Q32M84 506 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 P3H1Q32P28 736 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 TMEM63BQ5T3F8 832 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 TSTD2Q5T7W7 516 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 CEP85Q6P2H3 762 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 NFRKBQ6P4R8 1299 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 RAB11FIP2Q7L804 512 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 SLC29A4Q7RTT9 530 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 RASAL3Q86YV0 1011 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 LINC01465Q8N7H1 131 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 FAM98AQ8NCA5 519 aaKnown RBP4.39□□□□□ -1.71
PCM1-220ENST00000523896 SLC22A17Q8WUG5 538 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 EIF3CQ99613 913 aaKnown RBP4.39□□□□□ -1.71
PCM1-220ENST00000523896 CINPQ9BW66 212 aaPredicted RBP4.39□□□□□ -1.71
PCM1-220ENST00000523896 VPS45Q9NRW7 570 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 SRP68Q9UHB9 627 aaKnown RBP4.39□□□□□ -1.71
PCM1-220ENST00000523896 CNTN6Q9UQ52 1028 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 GPR52Q9Y2T5 361 aa4.39□□□□□ -1.71
PCM1-220ENST00000523896 UBE2J1Q9Y385 318 aaPredicted RBP4.39□□□□□ -1.71
PCM1-220ENST00000523896 COL11A2P13942 1736 aaPredicted RBP4.38□□□□□ -1.71
PCM1-220ENST00000523896 CA12O43570 354 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 FAM155BO75949 473 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 CER1O95813 267 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 TMIGD3P0DMS9 266 aaPredicted RBP4.38□□□□□ -1.71
PCM1-220ENST00000523896 CCT5P48643 541 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 CYP4F2P78329 520 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 GPC5P78333 572 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 NHLH1Q02575 133 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 CCDC15Q0P6D6 951 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 PPFIA1Q13136 1202 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 BFSP2Q13515 415 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 FAM187BQ17R55 369 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 TIGD6Q17RP2 521 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 ZNF362Q5T0B9 420 aaPredicted RBP4.38□□□□□ -1.71
PCM1-220ENST00000523896 TTC22Q5TAA0 569 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 KIRREL2Q6UWL6 708 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 PTF1AQ7RTS3 328 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 KRT27Q7Z3Y8 459 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 CCDC117Q8IWD4 279 aaPredicted RBP4.38□□□□□ -1.71
PCM1-220ENST00000523896 CPXCR1Q8N123 301 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 C12orf76Q8N812 135 aaPredicted RBP4.38□□□□□ -1.71
PCM1-220ENST00000523896 TERB1Q8NA31 727 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 SCAMP5Q8TAC9 235 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 PPM1EQ8WY54 764 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 TRIM63Q969Q1 353 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 SARAFQ96BY9 339 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 TBC1D20Q96BZ9 403 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 REPS1Q96D71 796 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 EDC3Q96F86 508 aaKnown RBP4.38□□□□□ -1.71
PCM1-220ENST00000523896 SNX18Q96RF0 628 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 MMS19Q96T76 1030 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 CIPCQ9C0C6 399 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 SAP30LQ9HAJ7 183 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 SAYSD1Q9NPB0 183 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 IL17RBQ9NRM6 502 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 FBXO28Q9NVF7 368 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 GAR1Q9NY12 217 aaKnown RBP4.38□□□□□ -1.71
PCM1-220ENST00000523896 DAPP1Q9UN19 280 aa4.38□□□□□ -1.71
PCM1-220ENST00000523896 C19orf53Q9UNZ5 99 aaPredicted RBP4.38□□□□□ -1.71
PCM1-220ENST00000523896 CCDC187A0A096LP49 1063 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 LOC105369274A0A096LPK9 316 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 LOC102723532A0A0G2JNH3 316 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 EFCAB8A8MWE9 144 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 H7C1Q1 480 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 M0QZQ0 153 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 IRAK2O43187 625 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 PRAMEF2O60811 474 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 JTBO76095 146 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 LARGE1O95461 756 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 MBPP02686 304 aaPredicted RBP4.37□□□□□ -1.71
PCM1-220ENST00000523896 HNRNPCP07910 306 aaKnown RBP eCLIP4.37□□□□□ -1.71
PCM1-220ENST00000523896 APEHP13798 732 aaKnown RBP4.37□□□□□ -1.71
PCM1-220ENST00000523896 HSD3B1P14060 373 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 MATN1P21941 496 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 IGHMBP2P38935 993 aaKnown RBP4.37□□□□□ -1.71
PCM1-220ENST00000523896 PPM1FP49593 454 aaPredicted RBP4.37□□□□□ -1.71
PCM1-220ENST00000523896 RENBPP51606 427 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 ARL4CP56559 192 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 CFHR3Q02985 330 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 COLEC12Q5KU26 742 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 ACSM6Q6P461 480 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 NAPRTQ6XQN6 538 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 TRIM72Q6ZMU5 477 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 RINLQ6ZS11 566 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 BCDIN3DQ7Z5W3 292 aaKnown RBP4.37□□□□□ -1.71
PCM1-220ENST00000523896 OR4N4Q8N0Y3 316 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 SPPL3Q8TCT6 385 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 GLMPQ8WWB7 406 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 THAP4Q8WY91 577 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 GCC1Q96CN9 775 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 DAZAP1Q96EP5 407 aaKnown RBP4.37□□□□□ -1.71
PCM1-220ENST00000523896 MCRS1Q96EZ8 462 aa4.37□□□□□ -1.71
PCM1-220ENST00000523896 FAR2Q96K12 515 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms