RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	CNGA2	Q16280	664 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	PAPD7	Q5XG87	772 aa	Known RBP	5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	RETSAT	Q6NUM9	610 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	MZT2B	Q6NZ67	158 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	CFAP161	Q6P656	301 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	RFX8	Q6ZV50	586 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	SUGP1	Q8IWZ8	645 aa	Known RBP	5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	CCDC33	Q8N5R6	958 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	USP13	Q92995	863 aa	Predicted RBP	5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	MTFMT	Q96DP5	389 aa	Known RBP	5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	FAM167A	Q96KS9	214 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	RMDN3	Q96TC7	470 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	CNPPD1	Q9BV87	410 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	ITM2C	Q9NQX7	267 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	LMBRD1	Q9NUN5	540 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	CLIC5	Q9NZA1	410 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	GRHPR	Q9UBQ7	328 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	POLG2	Q9UHN1	485 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	OGDHL	Q9ULD0	1010 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	RAD54B	Q9Y620	910 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	C10orf71	Q711Q0	1435 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	PXDNL	A1KZ92	1463 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	PHRF1	Q9P1Y6	1649 aa	Known RBP	5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	TOPAZ1	Q8N9V7	1692 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	COL24A1	Q17RW2	1714 aa		5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	5.37	□□□□□ -1.55
SREK1-213	ENST00000523655	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655		A0A1W2PPL8	197 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	GOLGA6L3	A6NEY3	463 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	RRN3P2	A6NIE6	340 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	CCER2	I3L3R5	266 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	TRIAP1	O43715	76 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	ORC4	O43929	436 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	URI1	O94763	535 aa	Predicted RBP	5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	PARP1	P09874	1014 aa	Known RBP	5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	NHLRC4	P0CG21	123 aa	Predicted RBP	5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	CD6	P30203	668 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	GCLC	P48506	637 aa	Predicted RBP	5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	ALDH9A1	P49189	494 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	CCT8	P50990	548 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	MPP1	Q00013	466 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	MAP2K1	Q02750	393 aa	Predicted RBP	5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	FOXO1	Q12778	655 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	PLS1	Q14651	629 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	SLC35G1	Q2M3R5	365 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	ARL13B	Q3SXY8	428 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	ZACN	Q401N2	412 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	TMEM108	Q6UXF1	575 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	PPP1R32	Q7Z5V6	425 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	SESTD1	Q86VW0	696 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	ERP27	Q96DN0	273 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	SLC35A4	Q96G79	324 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	LTV1	Q96GA3	475 aa	Predicted RBP	5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	PBK	Q96KB5	322 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	STK33	Q9BYT3	514 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	SLC29A3	Q9BZD2	475 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	TTYH3	Q9C0H2	523 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	MAGEH1	Q9H213	219 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	UNC45A	Q9H3U1	944 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	STAP2	Q9UGK3	403 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	SERGEF	Q9UGK8	458 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	CRYL1	Q9Y2S2	319 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	RABGAP1	Q9Y3P9	1069 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	WNT6	Q9Y6F9	365 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	ITIH6	Q6UXX5	1313 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	KIAA0232	Q92628	1395 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	HFM1	A2PYH4	1435 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	SSH2	Q76I76	1423 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	PEAK1	Q9H792	1746 aa		5.36	□□□□□ -1.55
SREK1-213	ENST00000523655	ATP7B	P35670	1465 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	WDR91	A4D1P6	747 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655		H3BUI4	141 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	INO80B-WBP1	J3KQ70	363 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	DCLK1	O15075	740 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	MBD4	O95243	580 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	ARIH2	O95376	493 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	TTLL1	O95922	423 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	CDK4	P11802	303 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	TYR	P14679	529 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	ZFX	P17010	805 aa	Predicted RBP	5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	ITGAL	P20701	1170 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	DRD4	P21917	467 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	SLC7A1	P30825	629 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	LIPA	P38571	399 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	POU5F1	Q01860	360 aa	Known RBP	5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	POSTN	Q15063	836 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	FCRLB	Q6BAA4	426 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	GPATCH11	Q8N954	259 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	NGDN	Q8NEJ9	315 aa	Known RBP	5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	FAM136A	Q96C01	138 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	ZNF778	Q96MU6	729 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	SLC46A1	Q96NT5	459 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	PNPO	Q9NVS9	261 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	RLIM	Q9NVW2	624 aa		5.35	□□□□□ -1.55
SREK1-213	ENST00000523655	FEZ2	Q9UHY8	353 aa	Predicted RBP	5.35	□□□□□ -1.55

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