RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ATG4AQ8WYN0 398 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 SERPINB11Q96P15 392 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 OSBPL8Q9BZF1 889 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 CARD9Q9H257 536 aa9.71□□□□□ -0.86
SDCBP-212ENST00000523483 UXTQ9UBK9 157 aaPredicted RBP9.71□□□□□ -0.86
SDCBP-212ENST00000523483 COCHO43405 550 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 XYLBO75191 536 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 APOEP02649 317 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 PCK1P35558 622 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 ARL4AP40617 200 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 GRIN2CQ14957 1233 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 PABPC1LQ4VXU2 614 aaKnown RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 OTUD1Q5VV17 481 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 GAREM2Q75VX8 874 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 STRADAQ7RTN6 431 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 MAP7D3Q8IWC1 876 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 TSC1Q92574 1164 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 PBKQ96KB5 322 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 RNF38Q9H0F5 515 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 VCANP13611 3396 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 IRAK2O43187 625 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 ZMYND10O75800 440 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 RHOP08100 348 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 RHOXF2BP0C7M4 288 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 GOT1P17174 413 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 SCNN1AP37088 669 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 PSEN1P49768 467 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 BOLA3Q53S33 107 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 ELMSAN1Q6PJG2 1045 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 ANKS1BQ7Z6G8 1248 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 NLRC5Q86WI3 1866 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 ZNF354CQ86Y25 554 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 RBM41Q96IZ5 413 aaKnown RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 RHOXF2Q9BQY4 288 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 DDX47Q9H0S4 455 aaKnown RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 ANLNQ9NQW6 1124 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 CLDND1Q9NY35 253 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 DNMT3LQ9UJW3 386 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 MRPS23Q9Y3D9 190 aaKnown RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 NR2E1Q9Y466 385 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 DPYSL4O14531 572 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 CST8O60676 142 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 SLU7O95391 586 aaKnown RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 F9P00740 461 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 AVPR1AP37288 418 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 CKAP4Q07065 602 aaKnown RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 ADCY2Q08462 1091 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 NAA30Q147X3 362 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 ACAP1Q15027 740 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 GPR158Q5T848 1215 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 C1orf228Q6PIY5 440 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 DENND1CQ8IV53 801 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 TAB3Q8N5C8 712 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 PDZD8Q8NEN9 1154 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 MRPL38Q96DV4 380 aaKnown RBP9.7□□□□□ -0.86
SDCBP-212ENST00000523483 CCDC114Q96M63 670 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 EPC1Q9H2F5 836 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 VANGL2Q9ULK5 521 aa9.7□□□□□ -0.86
SDCBP-212ENST00000523483 GOLGA6L10A0A0M3HER8 536 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 KDELR1P24390 212 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 EPHB2P29323 1055 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 ADRA1BP35368 520 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 CCR2P41597 374 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 SMAD3P84022 425 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 TEAD2Q15562 447 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 WHAMMP3Q1A5X7 153 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 SPOCD1Q6ZMY3 1216 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 KRT12Q99456 494 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 HERPUD2Q9BSE4 406 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 SMOC2Q9H3U7 446 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 RBM12Q9NTZ6 932 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 DDX56Q9NY93 547 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 CLIC5Q9NZA1 410 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 DNMT3BQ9UBC3 853 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 OR12D3Q9UGF7 316 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 LCMT1Q9UIC8 334 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 FAM72CH0Y354 149 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 NRG2O14511 850 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 FSCN2O14926 492 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 PAGE1O75459 146 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 TADA3O75528 432 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 PTPN2P17706 415 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 HARS2P49590 506 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 VCPP55072 806 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 TPI1P60174 286 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 TFDP3Q5H9I0 405 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 FAM72AQ5TYM5 149 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 FAM72DQ6L9T8 149 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 GET4Q7L5D6 327 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 TFAP2DQ7Z6R9 452 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 ZC3H18Q86VM9 953 aaKnown RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 CHSY1Q86X52 802 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 FAM72BQ86X60 149 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 SLC13A5Q86YT5 568 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-212ENST00000523483 KATNAL2Q8IYT4 538 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 RCOR2Q8IZ40 523 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 CEP112Q8N8E3 955 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 EXD1Q8NHP7 514 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 C10orf88Q9H8K7 445 aa9.69□□□□□ -0.86
SDCBP-212ENST00000523483 WDR6Q9NNW5 1121 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms