RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 RBM12BQ8IXT5 1001 aaKnown RBP9.3□□□□□ -0.92
CSMD1-212ENST00000523387 GIPC3Q8TF64 312 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 PDCD6IPQ8WUM4 868 aaKnown RBP9.3□□□□□ -0.92
CSMD1-212ENST00000523387 PBXIP1Q96AQ6 731 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 ZDHHC15Q96MV8 337 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 TASP1Q9H6P5 420 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 NRBP2Q9NSY0 501 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 WARS2Q9UGM6 360 aaKnown RBP9.3□□□□□ -0.92
CSMD1-212ENST00000523387 ASTN2O75129 1339 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-212ENST00000523387 A0A088AWK7 358 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 WDR27A2RRH5 827 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 CXorf49A8MYA2 514 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-212ENST00000523387 GRIN3BO60391 1043 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 CRTAMO95727 393 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 PDAP1Q13442 181 aaKnown RBP9.3□□□□□ -0.92
CSMD1-212ENST00000523387 ZC3H12AQ5D1E8 599 aaKnown RBP9.3□□□□□ -0.92
CSMD1-212ENST00000523387 TEDDM1Q5T9Z0 273 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 SEL1L3Q68CR1 1132 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 ZBTB46Q86UZ6 589 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 CXorf38Q8TB03 319 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 HSPBAP1Q96EW2 488 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 SLC38A10Q9HBR0 1119 aa9.3□□□□□ -0.92
CSMD1-212ENST00000523387 JPH1Q9HDC5 661 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-212ENST00000523387 KLHL8Q9P2G9 620 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-212ENST00000523387 A0A1B0GUL6 1792 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 TRPM3Q9HCF6 1732 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 ATP9BO43861 1147 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 LRCH4O75427 683 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 TFE3P19532 575 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 SPRP35270 261 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 ARL1P40616 181 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 RAP1GAPP47736 663 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 AP3M2P53677 418 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 KLF10Q13118 480 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 ITPRIPL1Q6GPH6 555 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 UNC5AQ6ZN44 842 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 ZBTB49Q6ZSB9 765 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 TMC7Q7Z402 723 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 CNKSR2Q8WXI2 1034 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 BSNDQ8WZ55 320 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 WRNIP1Q96S55 665 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 PLGRKTQ9HBL7 147 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 APOBEC3GQ9HC16 384 aaKnown RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 BFARQ9NZS9 450 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 DOLKQ9UPQ8 538 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 TOP3BO95985 862 aaKnown RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 AOC1P19801 751 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 CRHR1P34998 444 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 MLH1P40692 756 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 GABRB2P47870 512 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 CCR3P51677 355 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 NAA20P61599 178 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 XKR3Q5GH77 459 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 CES3Q6UWW8 571 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 CROCCP3Q8IVE0 287 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 TTC16Q8NEE8 873 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 RXFP2Q8WXD0 754 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 CRYGNQ8WXF5 182 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 ZNF669Q96BR6 464 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 RCN3Q96D15 328 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 PLEKHG4BQ96PX9 1271 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 C1orf21Q9H246 121 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 VPS33BQ9H267 617 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 MRPL46Q9H2W6 279 aaKnown RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 ST6GALNAC4Q9H4F1 302 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 STN1Q9H668 368 aaKnown RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 RPF1Q9H9Y2 349 aaKnown RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 RPS6KL1Q9Y6S9 549 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 TTLL13PA6NNM8 815 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 H3BSA7 217 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 ITM2AO43736 263 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 HMGCRP04035 888 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 OCM2P0CE71 109 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 OCMP0CE72 109 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 CSH1P0DML2 217 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 CSH2P0DML3 217 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 EIF4BP23588 611 aaKnown RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 MRPS9P82933 396 aaKnown RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 OGDHQ02218 1023 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 TRMT10BQ6PF06 316 aaKnown RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 PID1Q7Z2X4 250 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 ACTRT2Q8TDY3 377 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 CDHR1Q96JP9 859 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 NLRP4Q96MN2 994 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 WDR41Q9HAD4 459 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 XPNPEP3Q9NQH7 507 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 RNF146Q9NTX7 359 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 FAM198AQ9UFP1 575 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 RAB26Q9ULW5 256 aa9.29□□□□□ -0.92
CSMD1-212ENST00000523387 FARP1Q9Y4F1 1045 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-212ENST00000523387 LRP5O75197 1615 aa9.28□□□□□ -0.92
CSMD1-212ENST00000523387 SDR42E2A6NKP2 422 aa9.28□□□□□ -0.92
CSMD1-212ENST00000523387 SPDYE16A6NNV3 312 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-212ENST00000523387 KDM1AO60341 852 aa9.28□□□□□ -0.92
CSMD1-212ENST00000523387 RXRBP28702 533 aa9.28□□□□□ -0.92
CSMD1-212ENST00000523387 HMOX2P30519 316 aa9.28□□□□□ -0.92
CSMD1-212ENST00000523387 ETV4P43268 484 aa9.28□□□□□ -0.92
CSMD1-212ENST00000523387 PSMD7P51665 324 aa9.28□□□□□ -0.92
CSMD1-212ENST00000523387 ZBTB17Q13105 803 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms