RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 SLC39A13Q96H72 371 aa26.7■■□□□ 1.86
NKX2-1-204ENST00000522719 GOLPH3Q9H4A6 298 aa26.7■■□□□ 1.86
NKX2-1-204ENST00000522719 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.7■■□□□ 1.86
NKX2-1-204ENST00000522719 COX16Q9P0S2 106 aa26.7■■□□□ 1.86
NKX2-1-204ENST00000522719 AMFRQ9UKV5 643 aa26.7■■□□□ 1.86
NKX2-1-204ENST00000522719 ARHGAP26Q9UNA1 814 aa26.7■■□□□ 1.86
NKX2-1-204ENST00000522719 USP15Q9Y4E8 981 aaPredicted RBP26.7■■□□□ 1.86
NKX2-1-204ENST00000522719 IGLV3-27P01718 113 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 MIPP30301 263 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 CCR1P32246 355 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 AIF1P55008 147 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 MTA1Q13330 715 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 SMAD4Q13485 552 aaKnown RBP26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 CBX2Q14781 532 aaPredicted RBP26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 ZNF569Q5MCW4 686 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 GET4Q7L5D6 327 aaPredicted RBP26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 PEX26Q7Z412 305 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 NT5DC3Q86UY8 548 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 WDCPQ9H6R7 721 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 USP18Q9UMW8 372 aa26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 ZFP37Q9Y6Q3 630 aaPredicted RBP26.69■■□□□ 1.86
NKX2-1-204ENST00000522719 PRPSAP2O60256 369 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 ATXN1P54253 815 aaKnown RBP26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 RAB6CQ53S08 254 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 LRRC38Q5VT99 294 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 NUGGCQ68CJ6 796 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 SCYL2Q6P3W7 929 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 DDX42Q86XP3 938 aaKnown RBP eCLIP26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 UNC45BQ8IWX7 931 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 RNF34Q969K3 372 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 ZFRQ96KR1 1074 aaKnown RBP26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 RAB6CQ9H0N0 254 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 POMKQ9H5K3 350 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 CDH7Q9ULB5 785 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 CPQQ9Y646 472 aa26.68■■□□□ 1.86
NKX2-1-204ENST00000522719 SSR1P43307 286 aaKnown RBP26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 ARL13BQ3SXY8 428 aa26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 BOLA3Q53S33 107 aa26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 DAB2IPQ5VWQ8 1189 aa26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 FAM131BQ86XD5 332 aa26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 NTAN1Q96AB6 310 aa26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 FCRL2Q96LA5 508 aaPredicted RBP26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 ZSWIM3Q96MP5 696 aa26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 TDP1Q9NUW8 608 aa26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 ARHGEF38Q9NXL2 777 aa26.67■■□□□ 1.86
NKX2-1-204ENST00000522719 APOEP02649 317 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 TCF3P15923 654 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 SLC25A11Q02978 314 aaKnown RBP26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 ZC3H12AQ5D1E8 599 aaKnown RBP26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 POLNQ7Z5Q5 900 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 CPNE8Q86YQ8 564 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 RHOT1Q8IXI2 618 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 ZSCAN18Q8TBC5 510 aaPredicted RBP26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 CD101Q93033 1021 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 KIF9Q9HAQ2 790 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 GKN1Q9NS71 199 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 PCSK1NQ9UHG2 260 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 HYOU1Q9Y4L1 999 aa26.66■■□□□ 1.86
NKX2-1-204ENST00000522719 KCNU1A8MYU2 1149 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 MIF4GDA9UHW6 222 aaKnown RBP26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 MBTPS2O43462 519 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 PSTPIP1O43586 416 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 STC2O76061 302 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 FTCDO95954 541 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 KRT7P08729 469 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 TAS2R40P59535 323 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 GNG11P61952 73 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 LEXMQ3ZCV2 418 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 POTEHQ6S545 545 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 NYAP1Q6ZVC0 841 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 PSTKQ8IV42 348 aaKnown RBP26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 ARID3BQ8IVW6 561 aaPredicted RBP26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 USP13Q92995 863 aaPredicted RBP26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 DCLK3Q9C098 648 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 SMPD4Q9NXE4 827 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 SLC12A6Q9UHW9 1150 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 JRKLQ9Y4A0 524 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 GRXCR2A6NFK2 248 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 HMBSP08397 361 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 TCF4P15884 667 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 ADRA1BP35368 520 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 HARS2P49590 506 aaKnown RBP26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 SCAPQ12770 1279 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 ERMARDQ5T6L9 678 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 MEI1Q5TIA1 1274 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 SLC35F6Q8N357 371 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 MAFAQ8NHW3 353 aaPredicted RBP26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 TEKT4Q8WW24 435 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 AZIN2Q96A70 460 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 ASB16Q96NS5 453 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 PEBP4Q96S96 227 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 TKTL2Q9H0I9 626 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 TRPV4Q9HBA0 871 aa26.65■■□□□ 1.86
NKX2-1-204ENST00000522719 CCDC66A2RUB6 948 aa26.64■■□□□ 1.85
NKX2-1-204ENST00000522719 TUBB4AP04350 444 aa26.64■■□□□ 1.85
NKX2-1-204ENST00000522719 CTNNA2P26232 953 aa26.64■■□□□ 1.85
NKX2-1-204ENST00000522719 IL1R2P27930 398 aa26.64■■□□□ 1.85
NKX2-1-204ENST00000522719 CTNNA1P35221 906 aaKnown RBP26.64■■□□□ 1.85
NKX2-1-204ENST00000522719 KCNQ1P51787 676 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms