RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 SGSM1Q2NKQ1 1148 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 SLC9A9Q8IVB4 645 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 IQUBQ8NA54 791 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 SETD7Q8WTS6 366 aaKnown RBP12.93□□□□□ -0.34
BRF2-204ENST00000522539 HNRNPLLQ8WVV9 542 aaKnown RBP12.93□□□□□ -0.34
BRF2-204ENST00000522539 BHMTQ93088 406 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 TWNKQ96RR1 684 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 NUP58Q9BVL2 599 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 ZSCAN16Q9H4T2 348 aaPredicted RBP12.93□□□□□ -0.34
BRF2-204ENST00000522539 MAGEF1Q9HAY2 307 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 OSGEPQ9NPF4 335 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 ELOVL2Q9NXB9 296 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 EIF2B4Q9UI10 523 aaKnown RBP12.93□□□□□ -0.34
BRF2-204ENST00000522539 NUDT5Q9UKK9 219 aa12.93□□□□□ -0.34
BRF2-204ENST00000522539 ASXL3Q9C0F0 2248 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 PVALEFA0A1B0GWK0 134 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 CHKAP35790 457 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 DLG4P78352 724 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 ZNF234Q14588 700 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 E2F5Q15329 346 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 SMAD1Q15797 465 aaKnown RBP12.92□□□□□ -0.34
BRF2-204ENST00000522539 PTPRNQ16849 979 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 C10orf120Q5SQS8 335 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 TMEM215Q68D42 235 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 SHC4Q6S5L8 630 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 ANKS1BQ7Z6G8 1248 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 SCUBE3Q8IX30 993 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 FAM217AQ8IXS0 508 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 GALNT15Q8N3T1 639 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 CPXM2Q8N436 756 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 GOLGA5Q8TBA6 731 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 RHBDD1Q8TEB9 315 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 UCMAQ8WVF2 138 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 PRCCQ92733 491 aaPredicted RBP12.92□□□□□ -0.34
BRF2-204ENST00000522539 DHX58Q96C10 678 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 CDK5RAP1Q96SZ6 601 aaKnown RBP12.92□□□□□ -0.34
BRF2-204ENST00000522539 MIR1-1HGQ9H1L0 117 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 SLC39A2Q9NP94 309 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 CLEC4EQ9ULY5 219 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 BTBD3Q9Y2F9 522 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 SLCO1B1Q9Y6L6 691 aa12.92□□□□□ -0.34
BRF2-204ENST00000522539 HELZ2Q9BYK8 2649 aaKnown RBP12.92□□□□□ -0.34
BRF2-204ENST00000522539 IKBKBO14920 756 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 SPTLC2O15270 562 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 PAPSS1O43252 624 aaPredicted RBP12.91□□□□□ -0.34
BRF2-204ENST00000522539 STX6O43752 255 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 PCDHGA12O60330 932 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 SYNCRIPO60506 623 aaKnown RBP12.91□□□□□ -0.34
BRF2-204ENST00000522539 PRKCHP24723 683 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 ADORA2BP29275 332 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 AFF3P51826 1226 aaKnown RBP12.91□□□□□ -0.34
BRF2-204ENST00000522539 COG7P83436 770 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 CAMK2GQ13555 558 aaPredicted RBP12.91□□□□□ -0.34
BRF2-204ENST00000522539 STK38Q15208 465 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 KIF19Q2TAC6 998 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 C1orf220Q5T0J3 134 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 SV2AQ7L0J3 742 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 TADA2BQ86TJ2 420 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 CYFIP2Q96F07 1278 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 LRIG1Q96JA1 1093 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 SLC2A11Q9BYW1 496 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 DCLK3Q9C098 648 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 NAGPAQ9UK23 515 aa12.91□□□□□ -0.34
BRF2-204ENST00000522539 AGO1Q9UL18 857 aaKnown RBP12.91□□□□□ -0.34
BRF2-204ENST00000522539 MYH10P35580 1976 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 A0A1B0GVT2 93 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 TRABD2BA6NFA1 517 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 E9PAM4 449 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 TNFSF14O43557 240 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 TIMM44O43615 452 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 RALAP11233 206 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 CASP1P29466 404 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 CORO1AP31146 461 aaKnown RBP12.9□□□□□ -0.34
BRF2-204ENST00000522539 GRIA4P48058 902 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 CSNK1EP49674 416 aaKnown RBP12.9□□□□□ -0.34
BRF2-204ENST00000522539 CYP4F3Q08477 520 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 PDE4CQ08493 712 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 SUZ12Q15022 739 aaKnown RBP12.9□□□□□ -0.34
BRF2-204ENST00000522539 SPOPLQ6IQ16 392 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 MARCH9Q86YJ5 346 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 OR2T3Q8NH03 318 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 GBP4Q96PP9 640 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 ORAI3Q9BRQ5 295 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 NT5C1AQ9BXI3 368 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 DUSP16Q9BY84 665 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 BLZF1Q9H2G9 400 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 TMEM245Q9H330 911 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 KCTD10Q9H3F6 313 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 C6orf106Q9H6K1 298 aaPredicted RBP12.9□□□□□ -0.34
BRF2-204ENST00000522539 CYP3A43Q9HB55 503 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.9□□□□□ -0.34
BRF2-204ENST00000522539 SNX11Q9Y5W9 270 aa12.9□□□□□ -0.34
BRF2-204ENST00000522539 GOLGA4Q13439 2230 aaKnown RBP12.9□□□□□ -0.34
BRF2-204ENST00000522539 NUMA1Q14980 2115 aa12.89□□□□□ -0.35
BRF2-204ENST00000522539 MUC22E2RYF6 1773 aaPredicted RBP12.89□□□□□ -0.35
BRF2-204ENST00000522539 CUTAO60888 179 aa12.89□□□□□ -0.35
BRF2-204ENST00000522539 EPHX1P07099 455 aa12.89□□□□□ -0.35
BRF2-204ENST00000522539 ACADMP11310 421 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms