RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 WNT1P04628 370 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 MBL2P11226 248 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 PLS3P13797 630 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 ACO1P21399 889 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 BDNFP23560 247 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 LMO2P25791 158 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 KRT2P35908 639 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 CCT6AP40227 531 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 MATR3P43243 847 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 CACNA2D1P54289 1103 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 RAD51AP2Q09MP3 1159 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 TAF10Q12962 218 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 SERINC3Q13530 473 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 DENND5BQ6ZUT9 1274 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 KANSL1Q7Z3B3 1105 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 SPATA2LQ8IUW3 424 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 CD302Q8IX05 232 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 KCNE4Q8WWG9 221 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 SNX19Q92543 992 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 KCNN1Q92952 543 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 SIPA1Q96FS4 1042 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 CRTAC1Q9NQ79 661 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 C2CD2Q9Y426 696 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 HEMK1Q9Y5R4 338 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 CRYBG3Q68DQ2 2970 aa9.43□□□□□ -0.9
TRAPPC9-212ENST00000521944 RP1L1Q8IWN7 2480 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 TISP43B9A030 160 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 LZTS3O60299 673 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 MT-CO3P00414 261 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 ABL1P00519 1130 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 TYRP14679 529 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 ACOT2P49753 483 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 PGFP49763 221 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 NOP14P78316 857 aaKnown RBP9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 BNIP3Q12983 259 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 TEAD4Q15561 434 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 KDM7AQ6ZMT4 941 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 CACUL1Q86Y37 369 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 C4orf32Q8N8J7 132 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 PLPP7Q8NBV4 271 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 RBBP8NLQ8NC74 664 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 ERMNQ8TAM6 284 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 ELF4Q99607 663 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 DPH1Q9BZG8 443 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 PCED1AQ9H1Q7 454 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 ZNF395Q9H8N7 513 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 EBF2Q9HAK2 575 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 THAP10Q9P2Z0 257 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 FBXO10Q9UK96 956 aa9.42□□□□□ -0.9
TRAPPC9-212ENST00000521944 SPENQ96T58 3664 aaKnown RBP9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 TP53BP1Q12888 1972 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 ENO4A6NNW6 628 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 NEDD8-MDP1E9PL57 170 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 WNT9AO14904 365 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 VILLO15195 856 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 PIGRP01833 764 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 IGHV4-34P06331 123 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 POU3F2P20265 443 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 PRKCHP24723 683 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 GUCY2CP25092 1073 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 CD27P26842 260 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 SCTRP47872 440 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 LSSP48449 732 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 PPP3CCP48454 512 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 ERVPABLB-1P60509 514 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 PSMC1P62191 440 aaKnown RBP9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 TLE1Q04724 770 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 ORC1Q13415 861 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 ILKQ13418 452 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 KYAT1Q16773 422 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 SOWAHAQ2M3V2 549 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 INAVAQ3KP66 663 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 ARL13BQ3SXY8 428 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 SV2CQ496J9 727 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 SFMBT2Q5VUG0 894 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 CDCP2Q5VXM1 449 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 VSTM1Q6UX27 236 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 CRELD2Q6UXH1 353 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 RUFY3Q7L099 469 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 LIMS2Q7Z4I7 341 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 SKAP1Q86WV1 359 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 DDX42Q86XP3 938 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 SCFD1Q8WVM8 642 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 PRCCQ92733 491 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 MYLPFQ96A32 169 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 ZNF775Q96BV0 537 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 VCPIP1Q96JH7 1222 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 INSM2Q96T92 566 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 IKZF4Q9H2S9 585 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 ASB7Q9H672 318 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 MARK1Q9P0L2 795 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 PAXBP1Q9Y5B6 917 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 NME7Q9Y5B8 376 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 KIF26BQ2KJY2 2108 aa9.41□□□□□ -0.9
TRAPPC9-212ENST00000521944 NPHP3-ACAD11A0A0J9YXS1 232 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 PP2D1A8MPX8 630 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 C10orf142B7Z368 130 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 ANKRD63C9JTQ0 380 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms