RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 VWA3BQ502W6 1294 aa22.49■■□□□ 1.19
HOXA3-204ENST00000521401 HSP90AA4PQ58FG1 418 aa22.49■■□□□ 1.19
HOXA3-204ENST00000521401 TRMT11Q7Z4G4 463 aaKnown RBP22.49■■□□□ 1.19
HOXA3-204ENST00000521401 FAM114A1Q8IWE2 563 aa22.49■■□□□ 1.19
HOXA3-204ENST00000521401 SCUBE3Q8IX30 993 aa22.49■■□□□ 1.19
HOXA3-204ENST00000521401 STK32AQ8WU08 396 aa22.49■■□□□ 1.19
HOXA3-204ENST00000521401 ARRDC1-AS1Q9H2J1 176 aa22.49■■□□□ 1.19
HOXA3-204ENST00000521401 NDST4Q9H3R1 872 aa22.49■■□□□ 1.19
HOXA3-204ENST00000521401 POLMQ9NP87 494 aaPredicted RBP22.49■■□□□ 1.19
HOXA3-204ENST00000521401 SAMSN1Q9NSI8 373 aaKnown RBP22.49■■□□□ 1.19
HOXA3-204ENST00000521401 WDR87Q6ZQQ6 2873 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 THAP12O43422 761 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 MED7O43513 233 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 ALDH1A2O94788 518 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 WASP42768 502 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 GEN1Q17RS7 908 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 USP39Q53GS9 565 aaKnown RBP22.48■■□□□ 1.19
HOXA3-204ENST00000521401 CT47A1Q5JQC4 288 aaPredicted RBP22.48■■□□□ 1.19
HOXA3-204ENST00000521401 PRR23CQ6ZRP0 262 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 RBM43Q6ZSC3 357 aaKnown RBP22.48■■□□□ 1.19
HOXA3-204ENST00000521401 TMEM110Q86TL2 294 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 WDTC1Q8N5D0 677 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 PIWIL1Q96J94 861 aaKnown RBP22.48■■□□□ 1.19
HOXA3-204ENST00000521401 TUBGCP2Q9BSJ2 902 aa22.48■■□□□ 1.19
HOXA3-204ENST00000521401 TCRBV21S2A2A0A5A6 115 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 PRR5-ARHGAP8B1AHC4 643 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 PAPSS1O43252 624 aaPredicted RBP22.47■■□□□ 1.19
HOXA3-204ENST00000521401 LATS1O95835 1130 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 BCKDHBP21953 392 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 ACADSBP45954 432 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 ARHGAP8P85298 464 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 KCNMA1Q12791 1236 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 PUM1Q14671 1186 aaKnown RBP eCLIP22.47■■□□□ 1.19
HOXA3-204ENST00000521401 PLA2G2CQ5R387 149 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 SMYD5Q6GMV2 418 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 GABRG3Q99928 467 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 ST7Q9NRC1 585 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 DNAJC12Q9UKB3 198 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 NAALADL1Q9UQQ1 740 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 PCDHGA5Q9Y5G8 931 aa22.47■■□□□ 1.19
HOXA3-204ENST00000521401 E5RJQ4 531 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 CYBBP04839 570 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 PRKCSHP14314 528 aaPredicted RBP22.46■■□□□ 1.19
HOXA3-204ENST00000521401 HOXB2P14652 356 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 HOXD9P28356 352 aaPredicted RBP22.46■■□□□ 1.19
HOXA3-204ENST00000521401 USP8P40818 1118 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 P2RY2P41231 377 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 CCDC6Q16204 474 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 PMS2CLQ68D20 193 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 CHPFQ8IZ52 775 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 FRMD1Q8N878 549 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 DQX1Q8TE96 717 aaKnown RBP22.46■■□□□ 1.19
HOXA3-204ENST00000521401 HMGB4Q8WW32 186 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 RLN3Q8WXF3 142 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 GBP4Q96PP9 640 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 TJP2Q9UDY2 1190 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 EML5Q05BV3 1969 aa22.46■■□□□ 1.19
HOXA3-204ENST00000521401 KCNJ18B7U540 433 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 FOXN3O00409 490 aaPredicted RBP22.45■■□□□ 1.18
HOXA3-204ENST00000521401 TSPAN3O60637 253 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 RHOBTB1O94844 696 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 NCAM1P13591 858 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 GABRG2P18507 467 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 RING1Q06587 406 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 KCNJ12Q14500 433 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 ELF2Q15723 593 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 MAP7D1Q3KQU3 841 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 MPPE1Q53F39 396 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 ADGRF1Q5T601 910 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 KIAA1211LQ6NV74 962 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 BEND5Q7L4P6 421 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 C11orf74Q86VG3 221 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 DDI1Q8WTU0 396 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 GOLGA1Q92805 767 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 CACNA2D2Q9NY47 1150 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 PCDHGC3Q9UN70 934 aa22.45■■□□□ 1.18
HOXA3-204ENST00000521401 WASH3PC4AMC7 463 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 SART1O43290 800 aaKnown RBP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 ZNF806P0C7X5 589 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 PNMA6AP0CW24 399 aaPredicted RBP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 GBP1P32455 592 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 CLCN1P35523 988 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 SGSHP51688 502 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 ATXN1P54253 815 aaKnown RBP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 TBX4P57082 545 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 PDCLQ13371 301 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 FAM133BQ5BKY9 247 aaKnown RBP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 TCP11X2Q5H9J9 407 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 SYPL2Q5VXT5 272 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 TMEM215Q68D42 235 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 ERMP1Q7Z2K6 904 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 ENOX1Q8TC92 643 aaKnown RBP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 IPO4Q8TEX9 1081 aaKnown RBP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 SLC39A13Q96H72 371 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 FCRL2Q96LA5 508 aaPredicted RBP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 SLC2A11Q9BYW1 496 aa22.44■■□□□ 1.18
HOXA3-204ENST00000521401 BCCIPQ9P287 314 aaKnown RBP eCLIP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 THAP10Q9P2Z0 257 aaPredicted RBP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 MBD1Q9UIS9 605 aaPredicted RBP22.44■■□□□ 1.18
HOXA3-204ENST00000521401 NFE2L3Q9Y4A8 694 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms