RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SREBF2Q12772 1141 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 STX3Q13277 289 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 ANKRD20A2Q5SQ80 823 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 ANKRD20A1Q5TYW2 823 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 OVOS1Q6IE37 1185 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 SOCS4Q8WXH5 440 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 E2F7Q96AV8 911 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 GLT1D1Q96MS3 346 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 PGLYRP2Q96PD5 576 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 ZNF670Q9BS34 389 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 OSBPL7Q9BZF2 842 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 C20orf96Q9NUD7 363 aaPredicted RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 HEY2Q9UBP5 337 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 DERAQ9Y315 318 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 DIAPH2O60879 1101 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 LTFP02788 710 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 CDH5P33151 784 aaPredicted RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 CPA2P48052 419 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 CLNS1AP54105 237 aaKnown RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 SLC1A5Q15758 541 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 VSTM1Q6UX27 236 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 MTDHQ86UE4 582 aaKnown RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 MIB1Q86YT6 1006 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 ATPAF2Q8N5M1 289 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 PPFIBP2Q8ND30 876 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 GABPB2Q8TAK5 448 aaPredicted RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 PABPC5Q96DU9 382 aaKnown RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 CSPG4P5Q96PW8 444 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 DUSP16Q9BY84 665 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 ABCG1P45844 678 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 NR2C2P49116 596 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 FLT3LGP49771 235 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 MRPS5P82675 430 aaKnown RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 KDSRQ06136 332 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 CCDC142Q17RM4 750 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 MSS51Q4VC12 460 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 C4orf22Q6V702 233 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 RNF135Q8IUD6 432 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 DCLK2Q8N568 766 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 GSDMBQ8TAX9 411 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 USP6NLQ92738 828 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 PPP1R36Q96LQ0 422 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 KCNK16Q96T55 309 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 APBA2Q99767 749 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 TXLNGYQ9BZA5 131 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 TKTL2Q9H0I9 626 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 EPB41L4BQ9H329 900 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 KAT6AQ92794 2004 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 SIPA1L1O43166 1804 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 GOLGA8TH3BQL2 631 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 CHADO15335 359 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 APOEP02649 317 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 TFE3P19532 575 aaPredicted RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 PSMB4P28070 264 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 SERPINB9P50453 376 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 CLCNKBP51801 687 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 ALDH18A1P54886 795 aaKnown RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 RGMBQ6NW40 437 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 RHBDF2Q6PJF5 856 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 ZNF467Q7Z7K2 595 aaPredicted RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 RYBPQ8N488 228 aaPredicted RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 OR6P1Q8NGX9 317 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 SRPK1Q96SB4 655 aaKnown RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 SLC17A7Q9P2U7 560 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 MYBPHLA2RUH7 354 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 DNM1LO00429 736 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 FBXO21O94952 628 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 HOXA11P31270 313 aaPredicted RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 SLC26A9Q7LBE3 791 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 CCNYL1Q8N7R7 359 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 SPON2Q9BUD6 331 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 MAGEB5Q9BZ81 275 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 ADAM7Q9H2U9 754 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 TMPRSS4Q9NRS4 437 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 ATP5HO75947 161 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 UPP2O95045 317 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 FSBPO95073 299 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 F9P00740 461 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 ENO1P06733 434 aaKnown RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 ERCC2P18074 760 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 MAP2K2P36507 400 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 SERPINB4P48594 390 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 HDAC4P56524 1084 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 MTFR1Q15390 333 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 MGAT5BQ3V5L5 792 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 YTHDF3Q7Z739 585 aaKnown RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 SLC25A41Q8N5S1 370 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 MCUQ8NE86 351 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 SLC35F5Q8WV83 523 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 SMARCD1Q96GM5 515 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 TMEM237Q96Q45 408 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 KCTD15Q96SI1 283 aaPredicted RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 SEPT5Q99719 369 aaPredicted RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 CXCL16Q9H2A7 254 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 MORF4L1Q9UBU8 362 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 APOBEC2Q9Y235 224 aaKnown RBP10.47□□□□□ -0.73
MCF2-209ENST00000520602 ACTL7BQ9Y614 415 aa10.47□□□□□ -0.73
MCF2-209ENST00000520602 FOCADQ5VW36 1801 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms