RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 PMPCBO75439 489 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 RTN3O95197 1032 aaPredicted RBP8.25□□□□□ -1.09
LSM1-202ENST00000520286 SPDEFO95238 335 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 MMP8P22894 467 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 ZFP36P26651 326 aaKnown RBP8.25□□□□□ -1.09
LSM1-202ENST00000520286 GKP32189 559 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 PRKD1Q15139 912 aaPredicted RBP8.25□□□□□ -1.09
LSM1-202ENST00000520286 LRRC24Q50LG9 513 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 WDR45BQ5MNZ6 344 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 ZNF618Q5T7W0 954 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 DPY19L3Q6ZPD9 716 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 ANKRD44Q8N8A2 993 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.25□□□□□ -1.09
LSM1-202ENST00000520286 LINS1Q8NG48 757 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 SLC2A12Q8TD20 617 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 NPIPB3Q92617 1050 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 RNF125Q96EQ8 232 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 MYEOVQ96EZ4 313 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 C7orf26Q96N11 449 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 TBCCD1Q9NVR7 557 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 ERCC6L2Q5T890 1561 aa8.25□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3DA0A087WVF3 549 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3IA0A087WXS9 549 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 A0A087X0M5 115 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3EA0A087X179 549 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3KA0A087X1G2 549 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 A0A1B0GX30 115 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3BA6NDS4 549 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3FA6NER0 549 aaPredicted RBP8.24□□□□□ -1.09
LSM1-202ENST00000520286 AGAP5A6NIR3 686 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 MBD3L5A6NJ08 208 aaPredicted RBP8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3LB9A6J9 549 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 MUSKO15146 869 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 NKX2-8O15522 239 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 CA12O43570 354 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3HP0C7X1 549 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 CREB1P16220 341 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 LAG3P18627 525 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 NR4A1P22736 598 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 MCM5P33992 734 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 PGM1P36871 562 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 RPL15P61313 204 aaKnown RBP8.24□□□□□ -1.09
LSM1-202ENST00000520286 TP53BP2Q13625 1128 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 NRN1LQ496H8 165 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3GQ6DHY5 549 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3CQ6IPX1 549 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 ZNF585AQ6P3V2 769 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 VWA1Q6PCB0 445 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 GPR149Q86SP6 731 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 TBC1D3Q8IZP1 549 aaPredicted RBP8.24□□□□□ -1.09
LSM1-202ENST00000520286 ZNF276Q8N554 614 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 CTHRC1Q96CG8 243 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 PGBD1Q96JS3 809 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 PIGSQ96S52 555 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 PLEKHA5Q9HAU0 1116 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 DKK3Q9UBP4 350 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 HSF4Q9ULV5 492 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 RCE1Q9Y256 329 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 CYP46A1Q9Y6A2 500 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 ABCC10Q5T3U5 1492 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 FGD5Q6ZNL6 1462 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 ADGRA2Q96PE1 1338 aa8.24□□□□□ -1.09
LSM1-202ENST00000520286 A0A1W2PPH5 198 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 TMEM200CA6NKL6 621 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 F5H0A9 414 aaPredicted RBP8.23□□□□□ -1.09
LSM1-202ENST00000520286 HNRNPRO43390 633 aaKnown RBP8.23□□□□□ -1.09
LSM1-202ENST00000520286 PROM1O43490 865 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 ONECUT2O95948 504 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 IL6RP08887 468 aaPredicted RBP8.23□□□□□ -1.09
LSM1-202ENST00000520286 CSF1P09603 554 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 ADRA1DP25100 572 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 PSMC2P35998 433 aaKnown RBP8.23□□□□□ -1.09
LSM1-202ENST00000520286 SELENOPP49908 381 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 SUMO2P61956 95 aaKnown RBP8.23□□□□□ -1.09
LSM1-202ENST00000520286 GUCY1B3Q02153 619 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 GALNT2Q10471 571 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 CBFBQ13951 182 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 KCTD2Q14681 263 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 GPR68Q15743 365 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 C16orf89Q6UX73 402 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 LRRC8DQ7L1W4 858 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 LNX2Q8N448 690 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 PTGR2Q8N8N7 351 aaPredicted RBP8.23□□□□□ -1.09
LSM1-202ENST00000520286 TDRD7Q8NHU6 1098 aaKnown RBP8.23□□□□□ -1.09
LSM1-202ENST00000520286 PRR25Q96S07 402 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 BARD1Q99728 777 aaKnown RBP8.23□□□□□ -1.09
LSM1-202ENST00000520286 CHCHD6Q9BRQ6 235 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 ALG8Q9BVK2 526 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 PARD6AQ9NPB6 346 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 ST6GALNAC2Q9UJ37 374 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 ASAP1Q9ULH1 1129 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 SLC12A4Q9UP95 1085 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 SH2B3Q9UQQ2 575 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 PCDHB2Q9Y5E7 798 aa8.23□□□□□ -1.09
LSM1-202ENST00000520286 WDR97A6NE52 1622 aa8.22□□□□□ -1.09
LSM1-202ENST00000520286 CCDC187A0A096LP49 1063 aa8.22□□□□□ -1.09
LSM1-202ENST00000520286 PEPDP12955 493 aa8.22□□□□□ -1.09
LSM1-202ENST00000520286 ZNF37AP17032 561 aaPredicted RBP8.22□□□□□ -1.09
LSM1-202ENST00000520286 GRK5P34947 590 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms