RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 KIAA1324Q6UXG2 1013 aaKnown RBP5.2□□□□□ -1.58
SDCBP-207ENST00000520168 ERICH1Q86X53 443 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 MARCH9Q86YJ5 346 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 SFTPA1Q8IWL2 248 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 DAW1Q8N136 415 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 TMEM161BQ8NDZ6 487 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 STKLD1Q8NE28 680 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 PDZD8Q8NEN9 1154 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 C1orf216Q8TAB5 229 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 LRRC15Q8TF66 581 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 RFFLQ8WZ73 363 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 OVCA2Q8WZ82 227 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 TTC9Q92623 222 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 SLITRK1Q96PX8 696 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 TTLL2Q9BWV7 592 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 GPR174Q9BXC1 333 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 ITM2CQ9NQX7 267 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.2□□□□□ -1.582e-6■■■■■ 96.1
SDCBP-207ENST00000520168 SPHK2Q9NRA0 654 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 DDX43Q9NXZ2 648 aaKnown RBP5.2□□□□□ -1.58
SDCBP-207ENST00000520168 GMIPQ9P107 970 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 EIF2B4Q9UI10 523 aaKnown RBP5.2□□□□□ -1.58
SDCBP-207ENST00000520168 BTBD3Q9Y2F9 522 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 ANKRD6Q9Y2G4 727 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 CPQQ9Y646 472 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 CYP46A1Q9Y6A2 500 aa5.2□□□□□ -1.58
SDCBP-207ENST00000520168 NYNRINQ9P2P1 1898 aaKnown RBP5.2□□□□□ -1.58
SDCBP-207ENST00000520168 A0A1B0GVT2 93 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ZNF840PA6NDX5 716 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ANTXRLA6NF34 631 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ENC1O14682 589 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 PPEF2O14830 753 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 EPB41L2O43491 1005 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 CACNG3O60359 315 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 CDC45O75419 566 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 IL18RAPO95256 599 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 LDOC1O95751 146 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 PIGRP01833 764 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 MBL2P11226 248 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 TUBP50607 506 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 TPMTP51580 245 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 GUCY2FP51841 1108 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ERVPABLB-1P60509 514 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 BNC1Q01954 994 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 GRIN1Q05586 938 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 GOLGA8FQ08AF8 430 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 GOLGA8DPQ0D2H9 430 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 MESP2Q0VG99 397 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 MAPK7Q13164 816 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 TRIM29Q14134 588 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 LY6DQ14210 128 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 KIF19Q2TAC6 998 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ANO4Q32M45 955 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 CCDC157Q569K6 752 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 COLEC12Q5KU26 742 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 LY6G5CQ5SRR4 150 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ARHGAP40Q5TG30 622 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 SDHAF4Q5VUM1 108 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 EGFLAMQ63HQ2 1017 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 RINT1Q6NUQ1 792 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 TMEM214Q6NUQ4 689 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 FBXL19Q6PCT2 694 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 C1orf186Q6ZWK4 172 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ADAT2Q7Z6V5 191 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 SCN4BQ8IWT1 228 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 DHX40Q8IX18 779 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 TOP6BLQ8N6T0 577 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 UCMAQ8WVF2 138 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 PRCCQ92733 491 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 SIPA1Q96FS4 1042 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 CNDP2Q96KP4 475 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 PKMYT1Q99640 499 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 MSTO1Q9BUK6 570 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 SEMA4CQ9C0C4 833 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 SUV39H2Q9H5I1 410 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ZDHHC4Q9NPG8 344 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 DDX19AQ9NUU7 478 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 TMLHEQ9NVH6 421 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 DNAJC17Q9NVM6 304 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 DPP3Q9NY33 737 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 NOP53Q9NZM5 478 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 CFAP97Q9P2B7 532 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 WDR35Q9P2L0 1181 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ANKMY1Q9P2S6 941 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 MAGEC2Q9UBF1 373 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 LRWD1Q9UFC0 647 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 SEPT3Q9UH03 358 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 ADAMTS1Q9UHI8 967 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 CPSF3Q9UKF6 684 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 KIAA1024Q9UPX6 916 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 CLCA2Q9UQC9 943 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 SH3BP1Q9Y3L3 701 aa5.19□□□□□ -1.58
SDCBP-207ENST00000520168 TEP1Q99973 2627 aaKnown RBP5.19□□□□□ -1.58
SDCBP-207ENST00000520168 UTP20O75691 2785 aaKnown RBP5.18□□□□□ -1.58
SDCBP-207ENST00000520168 A0A0B4J269 797 aa5.18□□□□□ -1.58
SDCBP-207ENST00000520168 A0A1B0GTQ1 180 aa5.18□□□□□ -1.58
SDCBP-207ENST00000520168 CLGNO14967 610 aa5.18□□□□□ -1.58
SDCBP-207ENST00000520168 SYNCRIPO60506 623 aaKnown RBP5.18□□□□□ -1.58
SDCBP-207ENST00000520168 REC8O95072 547 aa5.18□□□□□ -1.58
SDCBP-207ENST00000520168 AFPP02771 609 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms