RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ELMOD1Q8N336 334 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 TTC39CQ8N584 583 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 GPR101Q96P66 508 aaPredicted RBP13.96□□□□□ -0.17
PABPC1-208ENST00000519004 FIZ1Q96SL8 496 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 CENPOQ9BU64 300 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 SLC13A1Q9BZW2 595 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 PARVGQ9HBI0 331 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 MKS1Q9NXB0 559 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 ANKMY1Q9P2S6 941 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 DNMT3BQ9UBC3 853 aaKnown RBP13.96□□□□□ -0.17
PABPC1-208ENST00000519004 PCDHGA3Q9Y5H0 932 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 FAM155AB1AL88 458 aaPredicted RBP13.96□□□□□ -0.17
PABPC1-208ENST00000519004 SGK1O00141 431 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 RFPL1O75677 317 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 MYO1DO94832 1006 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 ENO2P09104 434 aaPredicted RBP13.96□□□□□ -0.17
PABPC1-208ENST00000519004 NFATC3Q12968 1075 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 ATP13A4Q4VNC1 1196 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 PIGGQ5H8A4 983 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 C1orf220Q5T0J3 134 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 ARCQ7LC44 396 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 SIX5Q8N196 739 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 MYCT1Q8N699 235 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 UBR7Q8N806 425 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 DLG3Q92796 817 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 DCPSQ96C86 337 aaKnown RBP13.96□□□□□ -0.17
PABPC1-208ENST00000519004 EGLN2Q96KS0 407 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 SERPINI1Q99574 410 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 DNAJC28Q9NX36 388 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 AFG3L2Q9Y4W6 797 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 FRMPD2Q68DX3 1309 aaPredicted RBP13.96□□□□□ -0.17
PABPC1-208ENST00000519004 RGS13O14921 159 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 CLOCKO15516 846 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 ZBTB14O43829 449 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 CALCAP01258 141 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 C1QAP02745 245 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 ITGAVP06756 1048 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 WEE2P0C1S8 567 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 MYL4P12829 197 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 CD1EP15812 388 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 NCF2P19878 526 aaPredicted RBP13.95□□□□□ -0.18
PABPC1-208ENST00000519004 MLLT10P55197 1068 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 RAB39AQ14964 217 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 Q3C1V9 767 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF394Q53GI3 561 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 C2CD6Q53TS8 623 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 PPP6R3Q5H9R7 873 aaPredicted RBP13.95□□□□□ -0.18
PABPC1-208ENST00000519004 FAM182AQ5T1J6 154 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 ANGEL2Q5VTE6 544 aaKnown RBP13.95□□□□□ -0.18
PABPC1-208ENST00000519004 SIGIRRQ6IA17 410 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 ATG14Q6ZNE5 492 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 ZC3H7AQ8IWR0 971 aaKnown RBP13.95□□□□□ -0.18
PABPC1-208ENST00000519004 FAM47BQ8NA70 645 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 PDZD8Q8NEN9 1154 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 CALML6Q8TD86 181 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 NKD2Q969F2 451 aaPredicted RBP13.95□□□□□ -0.18
PABPC1-208ENST00000519004 CEP295NLQ96MC4 621 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 SLITRK1Q96PX8 696 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 SNED1Q8TER0 1413 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 COL4A1P02462 1669 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 C1orf232A0A0U1RR37 186 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 TRIM64A6NGJ6 449 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 H0YIN7 160 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 PSMD11O00231 422 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF195O14628 629 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 DCXO43602 365 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 PPP1R11O60927 126 aaPredicted RBP13.95□□□□□ -0.18
PABPC1-208ENST00000519004 TOM1L1O75674 476 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 FAM13AO94988 1023 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 KRT75O95678 551 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 UNGP13051 313 aaPredicted RBP13.95□□□□□ -0.18
PABPC1-208ENST00000519004 GRIA3P42263 894 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 TPTEP56180 551 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 CETN1Q12798 172 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 TRAF2Q12933 501 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 NME3Q13232 169 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 ABCB5Q2M3G0 1257 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 VWA5B1Q5TIE3 1220 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 RINT1Q6NUQ1 792 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 MFSD7Q6UXD7 560 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 FRA10AC1Q70Z53 315 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 SLC26A11Q86WA9 606 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 TERB1Q8NA31 727 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 PDCD6IPQ8WUM4 868 aaKnown RBP13.95□□□□□ -0.18
PABPC1-208ENST00000519004 FAR2Q96K12 515 aa13.95□□□□□ -0.18
PABPC1-208ENST00000519004 KBTBD13C9JR72 458 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 NOP56O00567 594 aaKnown RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 LDHCP07864 332 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 MCF2P10911 925 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 ATF7P17544 494 aaPredicted RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 IDUAP35475 653 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 ELK3P41970 407 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 ATXN3P54252 364 aaPredicted RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 KLF10Q13118 480 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 CEACAM7Q14002 265 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 TTC23LQ6PF05 361 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 BTLAQ7Z6A9 289 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF354CQ86Y25 554 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 CDRT15Q96T59 188 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 SLC29A1Q99808 456 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms