RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SLC22A17Q8WUG5 538 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 GLMPQ8WWB7 406 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 CHFRQ96EP1 664 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 FYTTD1Q96QD9 318 aaKnown RBP5.14□□□□□ -1.59
SQLE-202ENST00000518604 RNF26Q9BY78 433 aaPredicted RBP5.14□□□□□ -1.59
SQLE-202ENST00000518604 CPNE5Q9HCH3 593 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 VPS45Q9NRW7 570 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 SEMA4GQ9NTN9 838 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 LUZP4Q9P127 313 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 KIF17Q9P2E2 1029 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 SRP68Q9UHB9 627 aaKnown RBP5.14□□□□□ -1.59
SQLE-202ENST00000518604 CNTN6Q9UQ52 1028 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 ZBTB1Q9Y2K1 713 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 DGKBQ9Y6T7 804 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 TARM1B6A8C7 271 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 CA12O43570 354 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 RPP40O75818 363 aaKnown RBP5.13□□□□□ -1.59
SQLE-202ENST00000518604 PDE8BO95263 885 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 APEHP13798 732 aaKnown RBP5.13□□□□□ -1.59
SQLE-202ENST00000518604 GYS1P13807 737 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 FPR3P25089 353 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 IGHMBP2P38935 993 aaKnown RBP5.13□□□□□ -1.59
SQLE-202ENST00000518604 MCM2P49736 904 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 RENBPP51606 427 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 ELLP55199 621 aaPredicted RBP5.13□□□□□ -1.59
SQLE-202ENST00000518604 HSP90AB4PQ58FF6 505 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 NAPRTQ6XQN6 538 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 ANKRD18AQ8IVF6 992 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 SCAMP5Q8TAC9 235 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 SPPL3Q8TCT6 385 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 ADAMTS18Q8TE60 1221 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 CPT1BQ92523 772 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 RUBCNQ92622 972 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 SORCS2Q96PQ0 1159 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 MMS19Q96T76 1030 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 FAM167BQ9BTA0 163 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 VPS16Q9H269 839 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 IKZF4Q9H2S9 585 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 SAP30LQ9HAJ7 183 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 MLXIPQ9HAP2 919 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 USP29Q9HBJ7 922 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 LIN7CQ9NUP9 197 aaKnown RBP5.13□□□□□ -1.59
SQLE-202ENST00000518604 NDUFAF4Q9P032 175 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 SEMA5BQ9P283 1151 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 DAPP1Q9UN19 280 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 WNT6Q9Y6F9 365 aa5.13□□□□□ -1.59
SQLE-202ENST00000518604 CCDC187A0A096LP49 1063 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 LOC105369274A0A096LPK9 316 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 LOC102723532A0A0G2JNH3 316 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 NKX2-8O15522 239 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 CREB3O43889 395 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 EXOC3O60645 756 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 C1RP00736 705 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 JAK3P52333 1124 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 COPB1P53618 953 aaKnown RBP5.12□□□□□ -1.59
SQLE-202ENST00000518604 COL10A1Q03692 680 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 BIRC3Q13489 604 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 EFR3AQ14156 821 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 AAK1Q2M2I8 961 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 ADCK5Q3MIX3 580 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 ZNF362Q5T0B9 420 aaPredicted RBP5.12□□□□□ -1.59
SQLE-202ENST00000518604 TTC22Q5TAA0 569 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 SUMO4Q6EEV6 95 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 OR4N4Q8N0Y3 316 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 THAP4Q8WY91 577 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 REPS1Q96D71 796 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 KAZALD1Q96I82 304 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 REXO5Q96IC2 774 aaKnown RBP5.12□□□□□ -1.59
SQLE-202ENST00000518604 CCDC17Q96LX7 622 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 TRAPPC9Q96Q05 1148 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 AGAP2Q99490 1192 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 BRD8Q9H0E9 1235 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 KLK15Q9H2R5 256 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 CCDC134Q9H6E4 229 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 ELAC1Q9H777 363 aaKnown RBP5.12□□□□□ -1.59
SQLE-202ENST00000518604 IL17RBQ9NRM6 502 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 TMLHEQ9NVH6 421 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 ARPP21Q9UBL0 812 aaPredicted RBP5.12□□□□□ -1.59
SQLE-202ENST00000518604 ADAM21Q9UKJ8 722 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 GPR52Q9Y2T5 361 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 PCDHGB3Q9Y5G1 929 aa5.12□□□□□ -1.59
SQLE-202ENST00000518604 HMX3A6NHT5 357 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 TTC34A8MYJ7 566 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 POC1B-GALNT4F8VUJ3 575 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 UBE2Q2LH0YL09 131 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 AKAP8O43823 692 aaKnown RBP5.11□□□□□ -1.59
SQLE-202ENST00000518604 PRAMEF2O60811 474 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 PPP6R2O75170 966 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 SLPIP03973 132 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 CHRM5P08912 532 aaPredicted RBP5.11□□□□□ -1.59
SQLE-202ENST00000518604 GALNSP34059 522 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 ADD2P35612 726 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 RBM6P78332 1123 aaKnown RBP5.11□□□□□ -1.59
SQLE-202ENST00000518604 TLE3Q04726 772 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 SF3A3Q12874 501 aaKnown RBP eCLIP5.11□□□□□ -1.592e-7■■■■■ 43
SQLE-202ENST00000518604 RPS6KA2Q15349 733 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 TIGD6Q17RP2 521 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 BTBD16Q32M84 506 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 STRIP1Q5VSL9 837 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms