RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 HP1BP3Q5SSJ5 553 aaPredicted RBP17.2■□□□□ 0.34
PCM1-206ENST00000518537 FAM43BQ6ZT52 329 aaPredicted RBP17.2■□□□□ 0.34
PCM1-206ENST00000518537 BZW1Q7L1Q6 419 aaKnown RBP17.2■□□□□ 0.34
PCM1-206ENST00000518537 SCN4BQ8IWT1 228 aa17.2■□□□□ 0.34
PCM1-206ENST00000518537 COLEC11Q9BWP8 271 aa17.2■□□□□ 0.34
PCM1-206ENST00000518537 ARHGEF4Q9NR80 690 aa17.2■□□□□ 0.34
PCM1-206ENST00000518537 ABI2Q9NYB9 513 aaPredicted RBP17.2■□□□□ 0.34
PCM1-206ENST00000518537 FBXW11Q9UKB1 542 aa17.2■□□□□ 0.34
PCM1-206ENST00000518537 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.2■□□□□ 0.34
PCM1-206ENST00000518537 A0A087WUV0 522 aaPredicted RBP17.19■□□□□ 0.34
PCM1-206ENST00000518537 SYN3O14994 580 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 EIF3HO15372 352 aaKnown RBP eCLIP17.19■□□□□ 0.34
PCM1-206ENST00000518537 FASTKD3Q14CZ7 662 aaKnown RBP17.19■□□□□ 0.34
PCM1-206ENST00000518537 MFSD5Q6N075 450 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 KCNT2Q6UVM3 1135 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 CEP57Q86XR8 500 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 SCAMP5Q8TAC9 235 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 LRRN4Q8WUT4 740 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 QKIQ96PU8 341 aaKnown RBP eCLIP17.19■□□□□ 0.341e-7■■■■■ 33.2
PCM1-206ENST00000518537 PHACTR1Q9C0D0 580 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 DTLQ9NZJ0 730 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 ADAM28Q9UKQ2 775 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 MFHAS1Q9Y4C4 1052 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 TCRBV7S3A2A0A539 114 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 HOXA2O43364 376 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 TMEM63AO94886 807 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 ALDH2P05091 517 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 MDH1P40925 334 aaKnown RBP17.19■□□□□ 0.34
PCM1-206ENST00000518537 SLC5A3P53794 718 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 IFI35P80217 286 aaPredicted RBP17.19■□□□□ 0.34
PCM1-206ENST00000518537 GUCY1A3Q02108 690 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 GAD2Q05329 585 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 TCTN1Q2MV58 587 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 VARS2Q5ST30 1063 aaKnown RBP17.19■□□□□ 0.34
PCM1-206ENST00000518537 SCLYQ96I15 445 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 VPS37BQ9H9H4 285 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 RAB6BQ9NRW1 208 aa17.19■□□□□ 0.34
PCM1-206ENST00000518537 HACD1B0YJ81 288 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 TCEA3O75764 348 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 SCAPQ12770 1279 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 NFE2Q16621 373 aaPredicted RBP17.18■□□□□ 0.34
PCM1-206ENST00000518537 CTXN3Q4LDR2 81 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 FNBP1LQ5T0N5 605 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 FAM171A1Q5VUB5 890 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 C4orf22Q6V702 233 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 NPAS4Q8IUM7 802 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 ANKMY2Q8IV38 441 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 CCDC13Q8IYE1 715 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 CCDC33Q8N5R6 958 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 KLC2Q9H0B6 622 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 HIPK3Q9H422 1215 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 WDCPQ9H6R7 721 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 CHADO15335 359 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 MFSD11O43934 449 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 BANF1O75531 89 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 ATP5DP30049 168 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 CCL23P55773 120 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 YWHAGP61981 247 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCM1-206ENST00000518537 KCNJ11Q14654 390 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 BTBD8Q5XKL5 378 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 HEATR6Q6AI08 1181 aaKnown RBP17.18■□□□□ 0.34
PCM1-206ENST00000518537 LRRC31Q6UY01 552 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 PPP1R21Q6ZMI0 780 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 RFX8Q6ZV50 586 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 TAC4Q86UU9 113 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 PDIK1LQ8N165 341 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 CCDC110Q8TBZ0 833 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 PYROXD1Q8WU10 500 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 TFB1MQ8WVM0 346 aaKnown RBP17.18■□□□□ 0.34
PCM1-206ENST00000518537 RNF34Q969K3 372 aa17.18■□□□□ 0.34
PCM1-206ENST00000518537 CNOT10Q9H9A5 744 aaKnown RBP17.18■□□□□ 0.34
PCM1-206ENST00000518537 DGKIO75912 1065 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 SLC11A1P49279 550 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 CXCR3P49682 368 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 TPI1P60174 286 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 DPYSQ14117 519 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 BBS9Q3SYG4 887 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 SLC39A5Q6ZMH5 540 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 BEND5Q7L4P6 421 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 TAOK1Q7L7X3 1001 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 DQX1Q8TE96 717 aaKnown RBP17.17■□□□□ 0.34
PCM1-206ENST00000518537 FUBP3Q96I24 572 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCM1-206ENST00000518537 MRPL9Q9BYD2 267 aaKnown RBP17.17■□□□□ 0.34
PCM1-206ENST00000518537 PPP1R12CQ9BZL4 782 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 ABCC13Q9NSE7 274 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 SCN5AQ14524 2016 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 HTTP42858 3142 aa17.17■□□□□ 0.34
PCM1-206ENST00000518537 SF3B1O75533 1304 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■■□□ 17.2
PCM1-206ENST00000518537 TANC1Q9C0D5 1861 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 TBKBP1A7MCY6 615 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 TNFRSF10BO14763 440 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 PPARDQ03181 441 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 TNFAIP8L3Q5GJ75 292 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 FAM182AQ5T1J6 154 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 ZNF280DQ6N043 979 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 CAPN12Q6ZSI9 719 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 OLFM3Q96PB7 478 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 SELENOSQ9BQE4 189 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 TKTL2Q9H0I9 626 aa17.16■□□□□ 0.34
PCM1-206ENST00000518537 ANLNQ9NQW6 1124 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms