RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 NLRC4Q9NPP4 1024 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 FAM207AQ9NSI2 230 aaPredicted RBP6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 HCFC1R1Q9NWW0 138 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ZDHHC7Q9NXF8 308 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 IFNKQ9P0W0 207 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CEP72Q9P209 647 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 THEGQ9P2T0 379 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 DNMT3BQ9UBC3 853 aaKnown RBP6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 HSFX1Q9UBD0 423 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 HESX1Q9UBX0 185 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 KIAA1257Q9ULG3 409 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MAGED2Q9UNF1 606 aaPredicted RBP6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 FAM50BQ9Y247 325 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 STARD13Q9Y3M8 1113 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 USP15Q9Y4E8 981 aaPredicted RBP6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 YIPF1Q9Y548 306 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 FHOD1Q9Y613 1164 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ATP8B3O60423 1300 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 COL4A4P53420 1690 aaPredicted RBP6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 VWA8A3KMH1 1905 aa6.13□□□□□ -1.43
SCARNA6.1-201ENST00000516989 COL6A3P12111 3177 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SLC38A8A6NNN8 435 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 B2RBV5 119 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 F8VP50 259 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ZNF197O14709 1029 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PPP1R12AO14974 1030 aaPredicted RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CYP26A1O43174 497 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CBFA2T2O43439 604 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 NOL4O94818 638 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CALCAP01258 141 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PAEPP09466 180 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MYL4P12829 197 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 IL9P15248 144 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SP100P23497 879 aaPredicted RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 HOXA9P31269 272 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MAGEA11P43364 429 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 KCNQ1P51787 676 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CACNA2D1P54289 1103 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MAP3K7CLP57077 242 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SLC8A3P57103 927 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CBX2Q14781 532 aaPredicted RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CNGA2Q16280 664 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PABPC1LQ4VXU2 614 aaKnown RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ARHGAP17Q68EM7 881 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 DPY19L2P1Q6NXN4 242 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 C6orf15Q6UXA7 325 aaPredicted RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CYP26C1Q6V0L0 522 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 C20orf204Q6ZNR8 217 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PAQR9Q6ZVX9 377 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PDZD4Q76G19 769 aaPredicted RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 GAS2L3Q86XJ1 694 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 GPR161Q8N6U8 529 aaKnown RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 UBR7Q8N806 425 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ANKRD52Q8NB46 1076 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SMRP1Q8NCR6 262 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CMASQ8NFW8 434 aaPredicted RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 UBA3Q8TBC4 463 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ATXN2LQ8WWM7 1075 aaKnown RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ZNF606Q8WXB4 792 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SMARCD1Q96GM5 515 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 RPGRIP1Q96KN7 1286 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 C8orf48Q96LL4 319 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ERGIC2Q96RQ1 377 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 DUSP16Q9BY84 665 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 XPO4Q9C0E2 1151 aaKnown RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 NRSN2Q9GZP1 204 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ATXN3LQ9H3M9 355 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 WDR6Q9NNW5 1121 aaKnown RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 OSGEPQ9NPF4 335 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PLCB1Q9NQ66 1216 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ASAH2Q9NR71 780 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 KRT82Q9NSB4 513 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 REV1Q9UBZ9 1251 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PFDN2Q9UHV9 154 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 AJAP1Q9UKB5 411 aaPredicted RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TSPAN16Q9UKR8 245 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SIK3Q9Y2K2 1263 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MRPS23Q9Y3D9 190 aaKnown RBP6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ASB3Q9Y575 518 aa6.12□□□□□ -1.43
SCARNA6.1-201ENST00000516989 A0A1W2PQC6 194 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SLC22A31A6NKX4 558 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 EPHB6O15197 1021 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 THAP12O43422 761 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MED7O43513 233 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 DNAJC6O75061 913 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 BEST1O76090 585 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 GFPT2O94808 682 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 RHOP08100 348 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PNMA6AP0CW24 399 aaPredicted RBP6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CSH1P0DML2 217 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CSH2P0DML3 217 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 GJA1P17302 382 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ATF6P18850 670 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 YWHAQP27348 245 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 KRT9P35527 623 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 STAT1P42224 750 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 GYS2P54840 703 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 BPIFB4P59827 614 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SQSTM1Q13501 440 aa6.11□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SMAD2Q15796 467 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms