RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 PRCCQ92733 491 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TOP1MTQ969P6 601 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZBTB9Q96C00 473 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZNF689Q96CS4 500 aaPredicted RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SPATA17Q96L03 361 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 OLFM3Q96PB7 478 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PHACTR1Q9C0D0 580 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 OSBPL2Q9H1P3 480 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 C10orf88Q9H8K7 445 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ANLNQ9NQW6 1124 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ARHGEF4Q9NR80 690 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TMPRSS4Q9NRS4 437 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ABCC13Q9NSE7 274 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TMEM39AQ9NV64 488 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 COMMD8Q9NX08 183 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ARHGEF38Q9NXL2 777 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ADAM21Q9UKJ8 722 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SHOC2Q9UQ13 582 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PCDHB5Q9Y5E4 795 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ALPK3Q96L96 1907 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MTCL1Q9Y4B5 1905 aaKnown RBP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SF3B1O75533 1304 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DOCK6Q96HP0 2047 aa5.63□□□□□ -1.51
SCARNA20.4-201ENST00000516969 KIAA1671Q9BY89 1806 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TRIM43BA6NCK2 446 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 C5orf60A6NFR6 353 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 KCNU1A8MYU2 1149 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 HACD1B0YJ81 288 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 NT5C1B-RDH14C9J2C7 533 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 E7ESA3 106 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FAM72CH0Y354 149 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 H3BRJ5 948 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 H7C0C1 242 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ALOX15BO15296 676 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GCATO75600 419 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TCEA3O75764 348 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 IFNB1P01574 187 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SHBGP04278 402 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 HAPLN1P10915 354 aaPredicted RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 HSPA8P11142 646 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ARL4AP40617 200 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MAGEA4P43358 317 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MAGEA6P43360 314 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ATP5OP48047 213 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ALDH7A1P49419 539 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZNF135P52742 658 aaPredicted RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GYS2P54840 703 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 YWHAGP61981 247 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 USP46P62068 366 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ROR1Q01973 937 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GBE1Q04446 702 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 NME3Q13232 169 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TERF2Q15554 542 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SLC45A4Q5BKX6 768 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TNFAIP8L3Q5GJ75 292 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RTP2Q5QGT7 225 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CEP85LQ5SZL2 805 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 UBAP2Q5T6F2 1119 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FAM72AQ5TYM5 149 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 AGBL2Q5U5Z8 902 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DENND2CQ68D51 928 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SLC8B1Q6J4K2 584 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FAM72DQ6L9T8 149 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZNF280DQ6N043 979 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MSANTD2Q6P1R3 559 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 KCNT2Q6UVM3 1135 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 C4orf22Q6V702 233 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RFX8Q6ZV50 586 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ANKS3Q6ZW76 656 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 BZW1Q7L1Q6 419 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TAC4Q86UU9 113 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZC3H18Q86VM9 953 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 HOOK3Q86VS8 718 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FAM72BQ86X60 149 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CEP57Q86XR8 500 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PPIL6Q8IXY8 311 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZNF276Q8N554 614 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TTC9BQ8N6N2 239 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 NAT8LQ8N9F0 302 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 OR2W6PQ8NHA6 318 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ADAM32Q8TC27 787 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DQX1Q8TE96 717 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 C2orf15Q8WU43 125 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 EDEM1Q92611 657 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 EXOC4Q96A65 974 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TRIM43Q96BQ3 446 aaPredicted RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 IGSF21Q96ID5 467 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PAWRQ96IZ0 340 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 B3GALT6Q96L58 329 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ATP6V1G3Q96LB4 118 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CEP295NLQ96MC4 621 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PWWP2AQ96N64 755 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 HAPLN3Q96S86 360 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RUFY1Q96T51 708 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TTPALQ9BTX7 342 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 VN1R3Q9BXE9 311 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CDC42EP4Q9H3Q1 356 aaKnown RBP5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SMOC2Q9H3U7 446 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FBXO44Q9H4M3 255 aa5.62□□□□□ -1.51
SCARNA20.4-201ENST00000516969 C11orf49Q9H6J7 331 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms