RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 SELENOOQ9BVL4 669 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RNF26Q9BY78 433 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TRIM2Q9C040 744 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 UNKQ9C0B0 810 aaKnown RBP3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 SAP30LQ9HAJ7 183 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ZBTB26Q9HCK0 441 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PAPOLBQ9NRJ5 636 aaKnown RBP3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ABHD10Q9NUJ1 306 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 SEMA5BQ9P283 1151 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 DDX20Q9UHI6 824 aaKnown RBP3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ANAPC4Q9UJX5 808 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 LRP12Q9Y561 859 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PCDHB2Q9Y5E7 798 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 EID1Q9Y6B2 187 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 SLC22A23A1A5C7 686 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 VSTM5A8MXK1 200 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 LACTBL1A8MY62 500 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 CTIFO43310 598 aaKnown RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 UGDHO60701 494 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 NDUFB8O95169 186 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 IDEP14735 1019 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ST6GAL1P15907 406 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 DRD1P21728 446 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 MATN1P21941 496 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TBXAS1P24557 533 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 HOXA7P31268 230 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ATICP31939 592 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 HTR7P34969 479 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 IGHMBP2P38935 993 aaKnown RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PBX1P40424 430 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RAE1P78406 368 aaKnown RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 GPS1Q13098 491 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 KCNJ12Q14500 433 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TRAPPC11Q7Z392 1133 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 KRT28Q7Z3Y7 464 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TFAP2DQ7Z6R9 452 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TMEM199Q8N511 208 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 SMRP1Q8NCR6 262 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 AKAP1Q92667 903 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 CELF1Q92879 486 aaKnown RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 EIF3CQ99613 913 aaKnown RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ZPBPQ9BS86 351 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 HTATIP2Q9BUP3 242 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TTLL2Q9BWV7 592 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 BTBD1Q9H0C5 482 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 VPS33BQ9H267 617 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 AGO4Q9HCK5 861 aaKnown RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PRDM11Q9NQV5 511 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ASNSD1Q9NWL6 643 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ZNF112Q9UJU3 913 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 COG5Q9UP83 839 aa3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TTBK1Q5TCY1 1321 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ZNF335Q9H4Z2 1342 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 DPPA5A6NC42 116 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RHPN2P1A8MT19 583 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ZSCAN9O15535 394 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 IL18RAPO95256 599 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 MBPP02686 304 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ENO1P06733 434 aaKnown RBP3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 HOXD12P35452 270 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 GSTM5P46439 218 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 NANOS2P60321 138 aaKnown RBP3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 MTAPQ13126 283 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 SEMA3BQ13214 749 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 DAG1Q14118 895 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 GRM3Q14832 879 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 DLGAP5Q15398 846 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 AASDHQ4L235 1098 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 FAXCQ5TGI0 409 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RRAGBQ5VZM2 374 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PDXDC1Q6P996 788 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RFX8Q6ZV50 586 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 LRRC46Q96FV0 321 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 P2RY11Q96G91 374 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TMEM204Q9BSN7 226 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 MRPL44Q9H9J2 332 aaKnown RBP3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 MOV10Q9HCE1 1003 aaKnown RBP3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TMEM8AQ9HCN3 771 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 FZD3Q9NPG1 666 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ZBTB40Q9NUA8 1239 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PCDHGB6Q9Y5F9 930 aa3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TRIP12Q14669 1992 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TMEM272A0A1B0GTI8 110 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PRR23D1E9PI22 279 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 AREL1O15033 823 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 SMAD6O43541 496 aaKnown RBP3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TSPAN6O43657 245 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PRR23D2P0DMB1 279 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 AKR1A1P14550 325 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RHCEP18577 417 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PGGT1BP53609 377 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RHDQ02161 417 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PPATQ06203 517 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 SEMA5AQ13591 1074 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 GBX1Q14549 363 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 INPP5JQ15735 1006 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 P3H1Q32P28 736 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TLDC1Q6P9B6 456 aa3.3□□□□□ -1.88
RNU6-1088P-201ENST00000516850 USP17L6PQ6QN14 398 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms