RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 CFHR3Q02985 330 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 NSUN2Q08J23 767 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 SREBF2Q12772 1141 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 TCF15Q12870 199 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 SNTA1Q13424 505 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 E2F2Q14209 437 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 HLFQ16534 295 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 GJC2Q5T442 439 aaPredicted RBP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 LAYNQ6UX15 382 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 SLC16A12Q6ZSM3 486 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 UBE2R2Q712K3 238 aaPredicted RBP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 USP37Q86T82 979 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 PDSS2Q86YH6 399 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 ABRAQ8N0Z2 381 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 CCDC185Q8N715 623 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 NEXN-AS1Q8NBZ9 246 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 LSM14AQ8ND56 463 aaKnown RBP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 TMEM171Q8WVE6 324 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 EDC3Q96F86 508 aaKnown RBP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 HIC2Q96JB3 615 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 SNX27Q96L92 541 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 C7orf25Q9BPX7 421 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 WDR83Q9BRX9 315 aaKnown RBP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 RTBDNQ9BSG5 229 aaPredicted RBP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 CABLES2Q9BTV7 478 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 MAGEH1Q9H213 219 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 MRPL46Q9H2W6 279 aaKnown RBP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 PLEKHA4Q9H4M7 779 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 CXorf36Q9H7Y0 433 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 EVA1AQ9H8M9 152 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 ZNF334Q9HCZ1 680 aaPredicted RBP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 GAR1Q9NY12 217 aaKnown RBP0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 ASAP1Q9ULH1 1129 aa0.22□□□□□ -2.37
RNU6-557P-201ENST00000516842 CKAP5Q14008 2032 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 FGF17O60258 216 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 ZNF821O75541 412 aaPredicted RBP0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 ARSBP15848 533 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 CREB1P16220 341 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 KCNA5P22460 613 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 PDE6CP51160 858 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 ZNF132P52740 706 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 SLC8A3P57103 927 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 SUMO2P61956 95 aaKnown RBP0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 DEUP1Q05D60 604 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 GRIK2Q13002 908 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 RASGRF1Q13972 1273 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 HNF4GQ14541 408 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 UGP2Q16851 508 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 SNAI3Q3KNW1 292 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 DNTTIP2Q5QJE6 756 aaKnown RBP0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 C8orf82Q6P1X6 216 aaPredicted RBP0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 C19orf48Q6RUI8 117 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 Q6ZSV7 163 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 KCNK18Q7Z418 384 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 ZNF280BQ86YH2 543 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 ARL14EPQ8N8R7 260 aaPredicted RBP0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 SMC1BQ8NDV3 1235 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 SECTM1Q8WVN6 248 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 TUBA1CQ9BQE3 449 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 C17orf80Q9BSJ5 609 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 POLDIP3Q9BY77 421 aaKnown RBP0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 GPR35Q9HC97 309 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 MGAT4CQ9UBM8 478 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 INTUQ9ULD6 942 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 ZBTB21Q9ULJ3 1066 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 MSRB2Q9Y3D2 182 aa0.21□□□□□ -2.38
RNU6-557P-201ENST00000516842 FRMPD2Q68DX3 1309 aaPredicted RBP0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 FAM171A2A8MVW0 826 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 TCP11X1B4DZS4 312 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 LIASO43766 372 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 PRAMEF2O60811 474 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 KCNJ13O60928 360 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 CHEK2O96017 543 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 DAOP14920 347 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 MARK3P27448 753 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 LOXL3P58215 753 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 MRPS9P82933 396 aaKnown RBP0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 SRSF2Q01130 221 aaKnown RBP0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 RIGQ13278 110 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 LONRF3Q496Y0 759 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 ZNF876PQ49A33 203 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 ZC3H12BQ5HYM0 836 aaKnown RBP0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 TOR2AQ5JU69 321 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 OTUD1Q5VV17 481 aaPredicted RBP0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 FAM166AQ6J272 317 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 FOXL2NBQ6ZUU3 175 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 NOTCH2NLQ7Z3S9 236 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 RASSF3Q86WH2 238 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 ANKRD44Q8N8A2 993 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 OR14A16Q8NHC5 309 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 ZPLD1Q8TCW7 415 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 CENPIQ92674 756 aaPredicted RBP0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 CELF1Q92879 486 aaKnown RBP0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 ZNF653Q96CK0 615 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 LGALS12Q96DT0 336 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 WDYHV1Q96HA8 205 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 FOXN4Q96NZ1 517 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 SLC2A13Q96QE2 648 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 CTRCQ99895 268 aa0.2□□□□□ -2.38
RNU6-557P-201ENST00000516842 C1orf43Q9BWL3 253 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms