RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 MTRRQ9UBK8 725 aa12.4□□□□□ -0.42
LMNA-224ENST00000515711 ANAPC5Q9UJX4 755 aa12.4□□□□□ -0.42
LMNA-224ENST00000515711 NAALADL1Q9UQQ1 740 aa12.4□□□□□ -0.42
LMNA-224ENST00000515711 SCML2Q9UQR0 700 aa12.4□□□□□ -0.42
LMNA-224ENST00000515711 BACE2Q9Y5Z0 518 aa12.4□□□□□ -0.42
LMNA-224ENST00000515711 MTMR11A4FU01 709 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 HACD1B0YJ81 288 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 GOLGA8KD6RF30 607 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 TBC1D4O60343 1298 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 EFEMP2O95967 443 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 IGLV3-25P01717 112 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 OR4Q2P0C623 313 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 RBP3P10745 1247 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 RAG1P15918 1043 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 PECAM1P16284 738 aaPredicted RBP12.39□□□□□ -0.43
LMNA-224ENST00000515711 IVDP26440 423 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 ACTN2P35609 894 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 HSD17B3P37058 310 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 PSEN1P49768 467 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 ITGA8P53708 1063 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 PMS2P54278 862 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 GRIN2CQ14957 1233 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 MORF4L2Q15014 288 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 CA9Q16790 459 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 SYPL2Q5VXT5 272 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 MFSD5Q6N075 450 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 RHBDF2Q6PJF5 856 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 CROCCP2Q86T23 111 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 HOOK3Q86VS8 718 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 RNF168Q8IYW5 571 aaPredicted RBP12.39□□□□□ -0.43
LMNA-224ENST00000515711 IQCKQ8N0W5 287 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 PQLC3Q8N755 202 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 PLD5Q8N7P1 536 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 PCDH19Q8TAB3 1148 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 RNF139Q8WU17 664 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 UBLCP1Q8WVY7 318 aaPredicted RBP12.39□□□□□ -0.43
LMNA-224ENST00000515711 PIK3R5Q8WYR1 880 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 NDRG1Q92597 394 aaKnown RBP12.39□□□□□ -0.43
LMNA-224ENST00000515711 ZNF689Q96CS4 500 aaPredicted RBP12.39□□□□□ -0.43
LMNA-224ENST00000515711 IGSF21Q96ID5 467 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 ZNF558Q96NG5 402 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 CSPG4P5Q96PW8 444 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 ASB2Q96Q27 587 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 SH3GL2Q99962 352 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 FAM118BQ9BPY3 351 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 FERMT1Q9BQL6 677 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 TMEM121Q9BTD3 319 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 HERC2P3Q9BVR0 1158 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 C1QTNF1Q9BXJ1 281 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 SMOC2Q9H3U7 446 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 PRDM5Q9NQX1 630 aaPredicted RBP12.39□□□□□ -0.43
LMNA-224ENST00000515711 PIGVQ9NUD9 493 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 DDIT4Q9NX09 232 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 HSFX1Q9UBD0 423 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 FBXW11Q9UKB1 542 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 SHOC2Q9UQ13 582 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
LMNA-224ENST00000515711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 BCLAF3A2AJT9 711 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 GOLGA6L10A6NI86 522 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 H7C0C1 242 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 IRAK2O43187 625 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 UPP2O95045 317 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 RARGP13631 454 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 IL4RP24394 825 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 ADRA1BP35368 520 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 PPM1AP35813 382 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 ATP5OP48047 213 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 HCAR3P49019 387 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 CXCR3P49682 368 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 ATXN1P54253 815 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 SMAD3P84022 425 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 MTA1Q13330 715 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 PSMD5Q16401 504 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 P3H1Q32P28 736 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 SPOUT1Q5T280 376 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 SLC8B1Q6J4K2 584 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 HIBCHQ6NVY1 386 aaPredicted RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 MSANTD2Q6P1R3 559 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 DARS2Q6PI48 645 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 PDZD4Q76G19 769 aaPredicted RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 TRMT10CQ7L0Y3 403 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 TAC4Q86UU9 113 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 MON1AQ86VX9 555 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 RELL1Q8IUW5 271 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 DQX1Q8TE96 717 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 RTP4Q96DX8 246 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 SERPINB11Q96P15 392 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 ZIM3Q96PE6 472 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 EPAS1Q99814 870 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 LRFN3Q9BTN0 628 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 PABPC3Q9H361 631 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 WDCPQ9H6R7 721 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 RC3H2Q9HBD1 1191 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 WDR6Q9NNW5 1121 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 OLA1Q9NTK5 396 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.38□□□□□ -0.43
LMNA-224ENST00000515711 IL37Q9NZH6 218 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms