RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 SOD2P04179 222 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 ACRP10323 421 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 GOT1P17174 413 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 HSD17B3P37058 310 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 ATP5OP48047 213 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 XRCC4Q13426 336 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 EIF4EBP2Q13542 120 aaPredicted RBP20.86■□□□□ 0.93
TRIO-223ENST00000515710 PSMD5Q16401 504 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 MGAT5BQ3V5L5 792 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 KIAA1841Q6NSI8 718 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 BZW1Q7L1Q6 419 aaKnown RBP20.86■□□□□ 0.93
TRIO-223ENST00000515710 RNF139Q8WU17 664 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 CEP295NLQ96MC4 621 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 FOXP3Q9BZS1 431 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 CDY1Q9Y6F8 540 aa20.86■□□□□ 0.93
TRIO-223ENST00000515710 FAM92AA1XBS5 289 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 TP73O15350 636 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 IFNB1P01574 187 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 HCAR3P49019 387 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 P3H1Q32P28 736 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 SDHAF4Q5VUM1 108 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 HIBCHQ6NVY1 386 aaPredicted RBP20.85■□□□□ 0.93
TRIO-223ENST00000515710 FAM117BQ6P1L5 589 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 LRIG3Q6UXM1 1119 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 DENND5BQ6ZUT9 1274 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 PCGF5Q86SE9 256 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 UNC45BQ8IWX7 931 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 GLIS1Q8NBF1 620 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 TMEM169Q96HH4 297 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 ZIM3Q96PE6 472 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 TPX2Q9ULW0 747 aaKnown RBP20.85■□□□□ 0.93
TRIO-223ENST00000515710 SLC27A5Q9Y2P5 690 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 ATP8A1Q9Y2Q0 1164 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 HEY1Q9Y5J3 304 aa20.85■□□□□ 0.93
TRIO-223ENST00000515710 A0A1W2PQH9 124 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 BCLAF3A2AJT9 711 aaKnown RBP20.84■□□□□ 0.93
TRIO-223ENST00000515710 OPA1O60313 960 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 VNN2O95498 520 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 ZSCAN5DPP0CG00 497 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 ETS1P14921 441 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 AMPD1P23109 780 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 YWHAQP27348 245 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 GGCXP38435 758 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 PMS2P54278 862 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 GPS1Q13098 491 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 UAP1Q16222 522 aaPredicted RBP20.84■□□□□ 0.93
TRIO-223ENST00000515710 BRMS1LQ5PSV4 323 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 PRUNE1Q86TP1 453 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 COLGALT1Q8NBJ5 622 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 UBLCP1Q8WVY7 318 aaPredicted RBP20.84■□□□□ 0.93
TRIO-223ENST00000515710 HERC2P3Q9BVR0 1158 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 VN1R3Q9BXE9 311 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 SMOC2Q9H3U7 446 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 SPG21Q9NZD8 308 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 EEF2KO00418 725 aaKnown RBP20.84■□□□□ 0.93
TRIO-223ENST00000515710 IRAK2O43187 625 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 RARGP13631 454 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 SEMA3BQ13214 749 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 NCBP2-AS2Q69YL0 99 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 CEP128Q6ZU80 1094 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 UBE2Q1Q7Z7E8 422 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 ZC3H18Q86VM9 953 aaKnown RBP20.84■□□□□ 0.93
TRIO-223ENST00000515710 TTC9BQ8N6N2 239 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 RNF34Q969K3 372 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 SEPT5Q99719 369 aaPredicted RBP20.84■□□□□ 0.93
TRIO-223ENST00000515710 TKTL2Q9H0I9 626 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 NMUR1Q9HB89 426 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 ARHGEF4Q9NR80 690 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 TMPRSS4Q9NRS4 437 aa20.84■□□□□ 0.93
TRIO-223ENST00000515710 CEP350Q5VT06 3117 aa20.83■□□□□ 0.93
TRIO-223ENST00000515710 H3BQF6 201 aa20.83■□□□□ 0.93
TRIO-223ENST00000515710 SYF2O95926 243 aaKnown RBP20.83■□□□□ 0.93
TRIO-223ENST00000515710 OAS2P29728 719 aaKnown RBP20.83■□□□□ 0.93
TRIO-223ENST00000515710 PSEN1P49768 467 aa20.83■□□□□ 0.93
TRIO-223ENST00000515710 GDF10P55107 478 aa20.83■□□□□ 0.93
TRIO-223ENST00000515710 DUSP4Q13115 394 aa20.83■□□□□ 0.93
TRIO-223ENST00000515710 PPIGQ13427 754 aaKnown RBP eCLIP20.83■□□□□ 0.931e-8■■■□□ 18.7
TRIO-223ENST00000515710 TMCO2Q7Z6W1 182 aaPredicted RBP20.83■□□□□ 0.93
TRIO-223ENST00000515710 CDKL3Q8IVW4 592 aaPredicted RBP20.83■□□□□ 0.93
TRIO-223ENST00000515710 CRISPLD1Q9H336 500 aa20.83■□□□□ 0.93
TRIO-223ENST00000515710 C10orf88Q9H8K7 445 aa20.83■□□□□ 0.93
TRIO-223ENST00000515710 ARHGEF38Q9NXL2 777 aa20.83■□□□□ 0.93
TRIO-223ENST00000515710 MRPL42Q9Y6G3 142 aaKnown RBP20.83■□□□□ 0.93
TRIO-223ENST00000515710 WDR27A2RRH5 827 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 CREB3O43889 395 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 OR1D2P34982 312 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 TUFMP49411 452 aaKnown RBP20.82■□□□□ 0.92
TRIO-223ENST00000515710 DSG1Q02413 1049 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 SLC20A2Q08357 652 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 MORF4L2Q15014 288 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 MSANTD2Q6P1R3 559 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 RFX8Q6ZV50 586 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 FAM71DQ8N9W8 422 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 SH3GL2Q99962 352 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 OSBPL2Q9H1P3 480 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 ADAM7Q9H2U9 754 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 PABPC3Q9H361 631 aaKnown RBP20.82■□□□□ 0.92
TRIO-223ENST00000515710 USP29Q9HBJ7 922 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 ANLNQ9NQW6 1124 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 CLIC5Q9NZA1 410 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms