RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 RASSF9O75901 435 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 CREB1P16220 341 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 UQCRC1P31930 480 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 ITGA8P53708 1063 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 ZNF91Q05481 1191 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 LARS2Q15031 903 aaKnown RBP5.34□□□□□ -1.55
RUFY3-215ENST00000515479 ZNF517Q6ZMY9 492 aaPredicted RBP5.34□□□□□ -1.55
RUFY3-215ENST00000515479 DCDC5Q6ZRR9 648 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 KCTD20Q7Z5Y7 419 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 MICU3Q86XE3 530 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 MAFAQ8NHW3 353 aaPredicted RBP5.34□□□□□ -1.55
RUFY3-215ENST00000515479 ZNF398Q8TD17 642 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 PNISRQ8TF01 805 aaKnown RBP5.34□□□□□ -1.55
RUFY3-215ENST00000515479 STAG1Q8WVM7 1258 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 HS6ST2Q96MM7 605 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 TRIM5Q9C035 493 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 SACM1LQ9NTJ5 587 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 ZIM2Q9NZV7 527 aa5.34□□□□□ -1.55
RUFY3-215ENST00000515479 DNMT3BQ9UBC3 853 aaKnown RBP5.34□□□□□ -1.55
RUFY3-215ENST00000515479 CEP350Q5VT06 3117 aa5.34□□□□□ -1.56
RUFY3-215ENST00000515479 USP19O94966 1318 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 H7C4K7 107 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 INSIG1O15503 277 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 SPRY2O43597 315 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 SNHG28P0DPA3 235 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 PRF1P14222 555 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 HOXD9P28356 352 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-215ENST00000515479 PTDSS1P48651 473 aaKnown RBP5.33□□□□□ -1.56
RUFY3-215ENST00000515479 SUMO3P55854 103 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-215ENST00000515479 TIRAPP58753 221 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 SWSAP1Q6NVH7 229 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 KRT28Q7Z3Y7 464 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 IRF2BP2Q7Z5L9 587 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 MAP4K1Q92918 833 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 CTHRC1Q96CG8 243 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 ZBTB45Q96K62 511 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-215ENST00000515479 STK31Q9BXU1 1019 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 C22orf23Q9BZE7 217 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 CPNE7Q9UBL6 633 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 MGAT4CQ9UBM8 478 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 FMN2Q9NZ56 1722 aa5.33□□□□□ -1.56
RUFY3-215ENST00000515479 CASZ1Q86V15 1759 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 SBNO1A3KN83 1393 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 GPRASP1Q5JY77 1395 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 SPATA31A5Q5VU36 1347 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 SPATA31A7Q8IWB4 1347 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 PYCARD-AS1I3L0S3 204 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 CCP110O43303 1012 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 RRP9O43818 475 aaKnown RBP5.32□□□□□ -1.56
RUFY3-215ENST00000515479 TMPRSS11DO60235 418 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 RFPL1O75677 317 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 TMEM191BP0C7N4 346 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 HGFP14210 728 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 BRAFP15056 766 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 SCP2P22307 547 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 KLRC1P26715 233 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 EPHB1P54762 984 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 TIAL1Q01085 375 aaKnown RBP eCLIP5.32□□□□□ -1.56
RUFY3-215ENST00000515479 DDX10Q13206 875 aaKnown RBP5.32□□□□□ -1.56
RUFY3-215ENST00000515479 KCNB1Q14721 858 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 GPR162Q16538 588 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 TRIM71Q2Q1W2 868 aaKnown RBP5.32□□□□□ -1.56
RUFY3-215ENST00000515479 TMEM63BQ5T3F8 832 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 LINC01465Q8N7H1 131 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.32□□□□□ -1.56
RUFY3-215ENST00000515479 TMEM60Q9H2L4 133 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 EBF3Q9H4W6 596 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 STK32BQ9NY57 414 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 HDAC9Q9UKV0 1011 aa5.32□□□□□ -1.56
RUFY3-215ENST00000515479 RGPD8O14715 1765 aaPredicted RBP5.32□□□□□ -1.56
RUFY3-215ENST00000515479 ARHGEF28Q8N1W1 1705 aaKnown RBP5.31□□□□□ -1.56
RUFY3-215ENST00000515479 USP47Q96K76 1375 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 QRICH2Q9H0J4 1663 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 CFAP69A5D8W1 941 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 TRIM43BA6NCK2 446 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 FAM227AF5H4B4 570 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 EXOC5O00471 708 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 PIAS2O75928 621 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 HSPA5P11021 654 aaKnown RBP5.31□□□□□ -1.56
RUFY3-215ENST00000515479 CYP19A1P11511 503 aaPredicted RBP5.31□□□□□ -1.56
RUFY3-215ENST00000515479 PGDP52209 483 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 CNN3Q15417 329 aaKnown RBP5.31□□□□□ -1.56
RUFY3-215ENST00000515479 SEC23BQ15437 767 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 CC2D1BQ5T0F9 858 aaKnown RBP5.31□□□□□ -1.56
RUFY3-215ENST00000515479 TMTC4Q5T4D3 741 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 VSTM1Q6UX27 236 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 SAMD14Q8IZD0 417 aaPredicted RBP5.31□□□□□ -1.56
RUFY3-215ENST00000515479 TRIM43Q96BQ3 446 aaPredicted RBP5.31□□□□□ -1.56
RUFY3-215ENST00000515479 RUNDC1Q96C34 613 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 WDYHV1Q96HA8 205 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 SIGLEC11Q96RL6 698 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 SYT17Q9BSW7 474 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 FOXP1Q9H334 677 aaPredicted RBP5.31□□□□□ -1.56
RUFY3-215ENST00000515479 TRIM36Q9NQ86 728 aa5.31□□□□□ -1.56
RUFY3-215ENST00000515479 LY6G6EA0A0G2JKS1 128 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 ZKSCAN1P17029 563 aaPredicted RBP5.3□□□□□ -1.56
RUFY3-215ENST00000515479 TKTP29401 623 aaKnown RBP5.3□□□□□ -1.56
RUFY3-215ENST00000515479 IGBP1P78318 339 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 ID2Q02363 134 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms