RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 SRGAP1Q7Z6B7 1085 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 MORC1Q86VD1 984 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.46□□□□□ -1.7
NEDD4-211ENST00000514893 LMO3Q8TAP4 145 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 MAML1Q92585 1016 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 ZDHHC12Q96GR4 267 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 TTLL2Q9BWV7 592 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 STK31Q9BXU1 1019 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 SEZ6LQ9BYH1 1024 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 CDT1Q9H211 546 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 C6orf106Q9H6K1 298 aaPredicted RBP4.46□□□□□ -1.7
NEDD4-211ENST00000514893 GABBR1Q9UBS5 961 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 IP6K2Q9UHH9 426 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 MYO6Q9UM54 1294 aa4.46□□□□□ -1.7
NEDD4-211ENST00000514893 TCF20Q9UGU0 1960 aaKnown RBP4.45□□□□□ -1.7
NEDD4-211ENST00000514893 TRIM43BA6NCK2 446 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 FAM227AF5H4B4 570 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 PODXLO00592 558 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 SLC3A2P08195 630 aaKnown RBP4.45□□□□□ -1.7
NEDD4-211ENST00000514893 CT47B1P0C2W7 299 aaPredicted RBP4.45□□□□□ -1.7
NEDD4-211ENST00000514893 HOXD12P35452 270 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 IDUAP35475 653 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 RFX2P48378 723 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 DGKQP52824 942 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 ZNF267Q14586 743 aaPredicted RBP4.45□□□□□ -1.7
NEDD4-211ENST00000514893 ANO6Q4KMQ2 910 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 RTL10Q7L3V2 364 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 YAF2Q8IY57 180 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 IL31RAQ8NI17 732 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 CELF1Q92879 486 aaKnown RBP4.45□□□□□ -1.7
NEDD4-211ENST00000514893 TRIM43Q96BQ3 446 aaPredicted RBP4.45□□□□□ -1.7
NEDD4-211ENST00000514893 PHF21BQ96EK2 531 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 WDR83Q9BRX9 315 aaKnown RBP4.45□□□□□ -1.7
NEDD4-211ENST00000514893 RNF26Q9BY78 433 aaPredicted RBP4.45□□□□□ -1.7
NEDD4-211ENST00000514893 TM6SF1Q9BZW5 370 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 SACM1LQ9NTJ5 587 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 DKK4Q9UBT3 224 aa4.45□□□□□ -1.7
NEDD4-211ENST00000514893 RAB27BO00194 218 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 NTN3O00634 580 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-211ENST00000514893 LDB3O75112 727 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 MBPP02686 304 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-211ENST00000514893 PKMP14618 531 aaKnown RBP4.44□□□□□ -1.7
NEDD4-211ENST00000514893 HSPA6P17066 643 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 DUSP1P28562 367 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 RBL1P28749 1068 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 NTSR1P30989 418 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 COPAP53621 1224 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 SUMO3P55854 103 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-211ENST00000514893 C6orf10Q5SRN2 563 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 ISM2Q6H9L7 571 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 FSTL5Q8N475 847 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-211ENST00000514893 NMD3Q96D46 503 aaKnown RBP4.44□□□□□ -1.7
NEDD4-211ENST00000514893 PRR11Q96HE9 360 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-211ENST00000514893 GATA5Q9BWX5 397 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-211ENST00000514893 ASNSD1Q9NWL6 643 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 RGS17Q9UGC6 210 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-211ENST00000514893 SPATA31A5Q5VU36 1347 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 SPATA31A7Q8IWB4 1347 aa4.44□□□□□ -1.7
NEDD4-211ENST00000514893 COL15A1P39059 1388 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 DPPA5A6NC42 116 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 TBX3O15119 743 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 IFNA2P01563 188 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 ENO1P06733 434 aaKnown RBP4.43□□□□□ -1.7
NEDD4-211ENST00000514893 RHCEP18577 417 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 ACVR2AP27037 513 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 IZUMO4Q1ZYL8 232 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 ODF3L2Q3SX64 289 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 GLE1Q53GS7 698 aaKnown RBP4.43□□□□□ -1.7
NEDD4-211ENST00000514893 INO80DQ53TQ3 878 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-211ENST00000514893 TTLL5Q6EMB2 1281 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 GRHL2Q6ISB3 625 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 SAP30LQ9HAJ7 183 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 ABHD10Q9NUJ1 306 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 PCDHGB1Q9Y5G3 927 aa4.43□□□□□ -1.7
NEDD4-211ENST00000514893 A0A087WYN8 130 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 ISM1B1AKI9 464 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 SOCS5O75159 536 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 WDR47O94967 919 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 CGAP01215 116 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 CHRNB1P11230 501 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 SOX2P48431 317 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 COMPP49747 757 aaPredicted RBP4.42□□□□□ -1.7
NEDD4-211ENST00000514893 ART1P52961 327 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 RAE1P78406 368 aaKnown RBP4.42□□□□□ -1.7
NEDD4-211ENST00000514893 ROR2Q01974 943 aaKnown RBP4.42□□□□□ -1.7
NEDD4-211ENST00000514893 ARL14EPQ8N8R7 260 aaPredicted RBP4.42□□□□□ -1.7
NEDD4-211ENST00000514893 IPCEF1Q8WWN9 437 aaPredicted RBP4.42□□□□□ -1.7
NEDD4-211ENST00000514893 ATP6V0A4Q9HBG4 840 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 ERVK-5Q9HDB9 667 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 AASDHPPTQ9NRN7 309 aa4.42□□□□□ -1.7
NEDD4-211ENST00000514893 DDX56Q9NY93 547 aaKnown RBP4.42□□□□□ -1.7
NEDD4-211ENST00000514893 PNMA8BQ9ULN7 279 aaPredicted RBP4.42□□□□□ -1.7
NEDD4-211ENST00000514893 DENND3A2RUS2 1198 aa4.41□□□□□ -1.7
NEDD4-211ENST00000514893 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
NEDD4-211ENST00000514893 PLGP00747 810 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-211ENST00000514893 TXNP10599 105 aaKnown RBP4.41□□□□□ -1.7
NEDD4-211ENST00000514893 CPA1P15085 419 aa4.41□□□□□ -1.7
NEDD4-211ENST00000514893 ZKSCAN1P17029 563 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-211ENST00000514893 BTF3P20290 206 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms