RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 CCDC40Q4G0X9 1142 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 PKDCCQ504Y2 493 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 SPDYCQ5MJ68 293 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 SH3PXD2AQ5TCZ1 1133 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 DAB2IPQ5VWQ8 1189 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 TTI2Q6NXR4 508 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 TMEM270Q6UE05 265 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 ANKS1BQ7Z6G8 1248 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 SLC41A1Q8IVJ1 513 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 SIX6OS1Q8N1H7 587 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 TFAP2BQ92481 460 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 PLD4Q96BZ4 506 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 MRGPRX1Q96LB2 322 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 IPO9Q96P70 1041 aaKnown RBP13.93□□□□□ -0.18
PFDN1-206ENST00000514611 ZSWIM1Q9BR11 485 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 METTL14Q9HCE5 456 aaKnown RBP13.93□□□□□ -0.18
PFDN1-206ENST00000514611 HOOK1Q9UJC3 728 aaKnown RBP13.93□□□□□ -0.18
PFDN1-206ENST00000514611 CTNND2Q9UQB3 1225 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 SLC27A6Q9Y2P4 619 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 STON1Q9Y6Q2 735 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 WDFY3Q8IZQ1 3526 aa13.93□□□□□ -0.18
PFDN1-206ENST00000514611 PLXND1Q9Y4D7 1925 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 NUP205Q92621 2012 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 M0QYV0 167 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 RNF225M0QZC1 329 aaPredicted RBP13.92□□□□□ -0.18
PFDN1-206ENST00000514611 GFRA2O00451 464 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 GABBR2O75899 941 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 CFIP05156 583 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 SETSIPP0DME0 302 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 LCP1P13796 627 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 ENGP17813 658 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 BRD2P25440 801 aaKnown RBP13.92□□□□□ -0.18
PFDN1-206ENST00000514611 RGS7P49802 495 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 DAOAP59103 153 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 ZNF33AQ06730 810 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 TRIP4Q15650 581 aaPredicted RBP13.92□□□□□ -0.18
PFDN1-206ENST00000514611 FUT11Q495W5 492 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 BSPRYQ5W0U4 402 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 KIAA1324Q6UXG2 1013 aaKnown RBP13.92□□□□□ -0.18
PFDN1-206ENST00000514611 SLC36A4Q6YBV0 504 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 FAM217AQ8IXS0 508 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 PPM1KQ8N3J5 372 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 CPXM2Q8N436 756 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 DDI1Q8WTU0 396 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 NELFBQ8WX92 580 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 SORCS1Q8WY21 1168 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 DHTKD1Q96HY7 919 aaPredicted RBP13.92□□□□□ -0.18
PFDN1-206ENST00000514611 PIWIL1Q96J94 861 aaKnown RBP13.92□□□□□ -0.18
PFDN1-206ENST00000514611 HSPA12BQ96MM6 686 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 CEP63Q96MT8 703 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 NT5C1BQ96P26 610 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 NUSAP1Q9BXS6 441 aaKnown RBP13.92□□□□□ -0.18
PFDN1-206ENST00000514611 THAP10Q9P2Z0 257 aaPredicted RBP13.92□□□□□ -0.18
PFDN1-206ENST00000514611 ANGPTL2Q9UKU9 493 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 PCDHB4Q9Y5E5 795 aa13.92□□□□□ -0.18
PFDN1-206ENST00000514611 PPP1R3GB7ZBB8 358 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 BIN1O00499 593 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 ZBTB24O43167 697 aaPredicted RBP13.91□□□□□ -0.18
PFDN1-206ENST00000514611 TSPAN3O60637 253 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 GADD45BO75293 160 aaPredicted RBP13.91□□□□□ -0.18
PFDN1-206ENST00000514611 ZNF217O75362 1048 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 CYBBP04839 570 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 HOXD9P28356 352 aaPredicted RBP13.91□□□□□ -0.18
PFDN1-206ENST00000514611 SGSHP51688 502 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 STX17P56962 302 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 ZNF252P-AS1Q0IIN9 211 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 LMAN2Q12907 356 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 TMEM215Q68D42 235 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 PMF1Q6P1K2 205 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 SLC23A3Q6PIS1 610 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 LCLAT1Q6UWP7 414 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 RRAGAQ7L523 313 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 CACUL1Q86Y37 369 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 ARHGEF19Q8IW93 802 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 TRIML1Q8N9V2 468 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 DEFB124Q8NES8 71 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 LMO3Q8TAP4 145 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 CLEC4CQ8WTT0 213 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 RNF139Q8WU17 664 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 KCTD13Q8WZ19 329 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 GTPBP4Q9BZE4 634 aaKnown RBP13.91□□□□□ -0.18
PFDN1-206ENST00000514611 CIPCQ9C0C6 399 aa13.91□□□□□ -0.18
PFDN1-206ENST00000514611 MKRN2Q9H000 416 aaKnown RBP13.91□□□□□ -0.18
PFDN1-206ENST00000514611 OLA1Q9NTK5 396 aaKnown RBP13.91□□□□□ -0.18
PFDN1-206ENST00000514611 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.91□□□□□ -0.18
PFDN1-206ENST00000514611 SPEGQ15772 3267 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 PMM2O15305 246 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 KRT37O76014 449 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 PAEPP09466 180 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 PRKCHP24723 683 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 HOXD12P35452 270 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 HARS2P49590 506 aaKnown RBP13.9□□□□□ -0.18
PFDN1-206ENST00000514611 ENPP2Q13822 863 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 MORC3Q14149 939 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 ZNF234Q14588 700 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 STARD3Q14849 445 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 ELOA2Q8IYF1 753 aaPredicted RBP13.9□□□□□ -0.18
PFDN1-206ENST00000514611 RBBP8NLQ8NC74 664 aaPredicted RBP13.9□□□□□ -0.18
PFDN1-206ENST00000514611 OR2I1PQ8NGU4 316 aa13.9□□□□□ -0.18
PFDN1-206ENST00000514611 SLC35F5Q8WV83 523 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms