RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 AVPR2P30518 371 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 HADHBP55084 474 aaKnown RBP8.69□□□□□ -1.02
CCL28-204ENST00000514421 EFEMP1Q12805 493 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 USP4Q13107 963 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 EML3Q32P44 896 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 TRIM68Q6AZZ1 485 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 HTR3DQ70Z44 454 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 BEND5Q7L4P6 421 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 BHLHA9Q7RTU4 235 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 VPS36Q86VN1 386 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 RALGPS2Q86X27 583 aaPredicted RBP8.69□□□□□ -1.02
CCL28-204ENST00000514421 GPR161Q8N6U8 529 aaKnown RBP8.69□□□□□ -1.02
CCL28-204ENST00000514421 LRRN4CLQ8ND94 238 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 FLCNQ8NFG4 579 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 RIN3Q8TB24 985 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 DDX1Q92499 740 aaKnown RBP8.69□□□□□ -1.02
CCL28-204ENST00000514421 FAM3CQ92520 227 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 TSC1Q92574 1164 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 GOLGA1Q92805 767 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 ZFRQ96KR1 1074 aaKnown RBP8.69□□□□□ -1.02
CCL28-204ENST00000514421 CARD6Q9BX69 1037 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 OSBPL6Q9BZF3 934 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 DCLK3Q9C098 648 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 EBF3Q9H4W6 596 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 TBC1D17Q9HA65 648 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 HPS4Q9NQG7 708 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 GTSE1Q9NYZ3 720 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 MARCH2Q9P0N8 246 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 ADAMTS1Q9UHI8 967 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 CYTH4Q9UIA0 394 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 SALL4Q9UJQ4 1053 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 STRIP2Q9ULQ0 834 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 TFR2Q9UP52 801 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 ZNF510Q9Y2H8 683 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 SAR1BQ9Y6B6 198 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 CAPN6Q9Y6Q1 641 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 PIAS3Q9Y6X2 628 aa8.69□□□□□ -1.02
CCL28-204ENST00000514421 PTPRDP23468 1912 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 FAM170BA6NMN3 283 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 CES2O00748 559 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 MDM4O15151 490 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 NCAM2O15394 837 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 PAPSS1O43252 624 aaPredicted RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 PI15O43692 258 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 NFATC1O95644 943 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 LSM8O95777 96 aaKnown RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 LTFP02788 710 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 ATP1A1P05023 1023 aaKnown RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 GLI1P08151 1106 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 ARSAP15289 507 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 AOC1P19801 751 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 CDH5P33151 784 aaPredicted RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 NUBP1P53384 320 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 YWHAZP63104 245 aaKnown RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 CDR2Q01850 454 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 TNK2Q07912 1038 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 PDCLQ13371 301 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 NAA30Q147X3 362 aaPredicted RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 ERCC6LQ2NKX8 1250 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 EFHC1Q5JVL4 640 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 TAF3Q5VWG9 929 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 OR6B2Q6IFH4 312 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 ALKBH5Q6P6C2 394 aaKnown RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 TPRG1Q6ZUI0 275 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 SLFN11Q7Z7L1 901 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 NOP9Q86U38 636 aaKnown RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 ERICH1Q86X53 443 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 MIB1Q86YT6 1006 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 ZDHHC17Q8IUH5 632 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 PASD1Q8IV76 773 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 CPA6Q8N4T0 437 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 MNS1Q8NEH6 495 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 TTC8Q8TAM2 541 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 IPO4Q8TEX9 1081 aaKnown RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 EDEM1Q92611 657 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 ATP2A3Q93084 1043 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 EXOC4Q96A65 974 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 OTUB2Q96DC9 234 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 ALS2CR12Q96Q35 445 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 TRIM62Q9BVG3 475 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 ISCUQ9H1K1 167 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 SYNCQ9H7C4 482 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 ECT2Q9H8V3 914 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 RASAL2Q9UJF2 1139 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 NOCTQ9UK39 431 aaKnown RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 LSM7Q9UK45 103 aaKnown RBP8.68□□□□□ -1.02
CCL28-204ENST00000514421 SNX12Q9UMY4 172 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 SIT1Q9Y3P8 196 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 WNT6Q9Y6F9 365 aa8.68□□□□□ -1.02
CCL28-204ENST00000514421 SLC12A8A0AV02 714 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 MACROD2A1Z1Q3 448 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 OTOL1A6NHN0 477 aaPredicted RBP8.67□□□□□ -1.02
CCL28-204ENST00000514421 SHISA7A6NL88 538 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 E5RJQ4 531 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 SPECC1L-ADORA2AF8WAN1 911 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 CAPN9O14815 690 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 GREM1O60565 184 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 CYP1A1P04798 512 aaPredicted RBP8.67□□□□□ -1.02
CCL28-204ENST00000514421 FYNP06241 537 aa8.67□□□□□ -1.02
CCL28-204ENST00000514421 TUBBP07437 444 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms