RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 UNC45BQ8IWX7 931 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 RNF168Q8IYW5 571 aaPredicted RBP8.68□□□□□ -1.02
RNF4-220ENST00000513578 LRRC43Q8N309 656 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 ARHGAP18Q8N392 663 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 ARFGAP2Q8N6H7 521 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 SPPL2BQ8TCT7 592 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 HASPINQ8TF76 798 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 NDRG1Q92597 394 aaKnown RBP8.68□□□□□ -1.02
RNF4-220ENST00000513578 PRCCQ92733 491 aaPredicted RBP8.68□□□□□ -1.02
RNF4-220ENST00000513578 ARMC5Q96C12 935 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 TLCD1Q96CP7 247 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 ZNF333Q96JL9 665 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 OLFM3Q96PB7 478 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 TMEM209Q96SK2 561 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 BRD8Q9H0E9 1235 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 OSBPL2Q9H1P3 480 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 PPCSQ9HAB8 311 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 PIGVQ9NUD9 493 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 NINJ2Q9NZG7 142 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 PAK5Q9P286 719 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 SAE1Q9UBE0 346 aaPredicted RBP8.68□□□□□ -1.02
RNF4-220ENST00000513578 SCML2Q9UQR0 700 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 PCDHB5Q9Y5E4 795 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 DOCK4Q8N1I0 1966 aa8.68□□□□□ -1.02
RNF4-220ENST00000513578 C5orf60A6NFR6 353 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 F8W810 466 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 H7C0C1 242 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 CHADO15335 359 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 NCAM2O15394 837 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 SHOX2O60902 331 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 ZSCAN5DPP0CG00 497 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 NCAM1P13591 858 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 ETS1P14921 441 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 MAGEA4P43358 317 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 ATP5OP48047 213 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 GLUD2P49448 558 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 GDF10P55107 478 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 YWHAGP61981 247 aaKnown RBP eCLIP8.67□□□□□ -1.02
RNF4-220ENST00000513578 PITX1P78337 314 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 NRG1Q02297 640 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 ZNF33AQ06730 810 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 IFFO1Q0D2I5 559 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 GPR17Q13304 367 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 IKBKEQ14164 716 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 PPP2R5DQ14738 602 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 STAT4Q14765 748 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 RASA2Q15283 850 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 PKN2Q16513 984 aaKnown RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 SLC39A12Q504Y0 691 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 PPP6R3Q5H9R7 873 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 FAM171A1Q5VUB5 890 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 MSANTD2Q6P1R3 559 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 FUT10Q6P4F1 479 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 C1orf228Q6PIY5 440 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 FBXO46Q6PJ61 603 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 NPNTQ6UXI9 565 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 PPP1R21Q6ZMI0 780 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 ANKS3Q6ZW76 656 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 CENPUQ71F23 418 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 PDZD4Q76G19 769 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 CTU1Q7Z7A3 348 aaKnown RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 MON1AQ86VX9 555 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 FAM131BQ86XD5 332 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 NUP93Q8N1F7 819 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 RIBC1Q8N443 379 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 ZNF276Q8N554 614 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 SLC7A14Q8TBB6 771 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 RNF139Q8WU17 664 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 CPT1BQ92523 772 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 SPATA17Q96L03 361 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 SERPINB12Q96P63 405 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 QKIQ96PU8 341 aaKnown RBP eCLIP8.67□□□□□ -1.02
RNF4-220ENST00000513578 RBM15Q96T37 977 aaKnown RBP eCLIP8.67□□□□□ -1.02
RNF4-220ENST00000513578 RHOBTB2Q9BYZ6 727 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 STMN4Q9H169 189 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 SMOC2Q9H3U7 446 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 FBXO44Q9H4M3 255 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 ARHGEF4Q9NR80 690 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 ARHGEF38Q9NXL2 777 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 HSFX1Q9UBD0 423 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 FETUBQ9UGM5 382 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 ZMYND8Q9ULU4 1186 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 PRG3Q9Y2Y8 225 aaPredicted RBP8.67□□□□□ -1.02
RNF4-220ENST00000513578 BACE2Q9Y5Z0 518 aa8.67□□□□□ -1.02
RNF4-220ENST00000513578 ABHD14A-ACY1A0A1B0GW23 586 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 DCLK1O15075 740 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 IRAK2O43187 625 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 EFCAB14O75071 495 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 RTN3O95197 1032 aaPredicted RBP8.66□□□□□ -1.02
RNF4-220ENST00000513578 AGTP01019 485 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 IFNB1P01574 187 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 GOT1P17174 413 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 TPSB2P20231 275 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 IBSPP21815 317 aaPredicted RBP8.66□□□□□ -1.02
RNF4-220ENST00000513578 AMPD1P23109 780 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 HOXC13P31276 330 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 ACTN2P35609 894 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 GRIK1P39086 918 aa8.66□□□□□ -1.02
RNF4-220ENST00000513578 GJA8P48165 433 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms