RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 SLC25A11Q02978 314 aaKnown RBP13.04□□□□□ -0.32
PDPN-210ENST00000513143 RING1Q06587 406 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 PPP2R5DQ14738 602 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
PDPN-210ENST00000513143 CCDC85BQ15834 202 aaPredicted RBP13.04□□□□□ -0.32
PDPN-210ENST00000513143 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.32
PDPN-210ENST00000513143 PEX26Q7Z412 305 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 MIB1Q86YT6 1006 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 SLC35F6Q8N357 371 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 CD101Q93033 1021 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 SLC39A13Q96H72 371 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 RIPOR3Q96MK2 946 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 KLF16Q9BXK1 252 aaPredicted RBP13.04□□□□□ -0.32
PDPN-210ENST00000513143 CD207Q9UJ71 328 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 AMFRQ9UKV5 643 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 HBS1LQ9Y450 684 aaKnown RBP13.04□□□□□ -0.32
PDPN-210ENST00000513143 SYNJ2BP-COX16A0A087WUM0 186 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 SLC12A8A0AV02 714 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 MBL2P11226 248 aaPredicted RBP13.03□□□□□ -0.32
PDPN-210ENST00000513143 TCF4P15884 667 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 IL1R2P27930 398 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 WEE1P30291 646 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 TBX4P57082 545 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
PDPN-210ENST00000513143 COG7P83436 770 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
PDPN-210ENST00000513143 BRMS1LQ5PSV4 323 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 MEI1Q5TIA1 1274 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 LRRC38Q5VT99 294 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 SCYL2Q6P3W7 929 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 CYP4V2Q6ZWL3 525 aaPredicted RBP13.03□□□□□ -0.32
PDPN-210ENST00000513143 POLNQ7Z5Q5 900 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 FAM131BQ86XD5 332 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 CMTM8Q8IZV2 173 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 ING5Q8WYH8 240 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 SUSD6Q92537 303 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 HES6Q96HZ4 224 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 ZFRQ96KR1 1074 aaKnown RBP13.03□□□□□ -0.32
PDPN-210ENST00000513143 FCRL2Q96LA5 508 aaPredicted RBP13.03□□□□□ -0.32
PDPN-210ENST00000513143 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 WDCPQ9H6R7 721 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 UBE2ZQ9H832 354 aaPredicted RBP13.03□□□□□ -0.32
PDPN-210ENST00000513143 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.03□□□□□ -0.32
PDPN-210ENST00000513143 COX16Q9P0S2 106 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 USP18Q9UMW8 372 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 EYSQ5T1H1 3165 aa13.03□□□□□ -0.32
PDPN-210ENST00000513143 KCNU1A8MYU2 1149 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 PSTPIP1O43586 416 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 PRPSAP2O60256 369 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 ZNF500O60304 480 aaPredicted RBP13.02□□□□□ -0.33
PDPN-210ENST00000513143 TUBB4AP04350 444 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 CKMP06732 381 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 SLC2A3P11169 496 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 CTNNA2P26232 953 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 CCR1P32246 355 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 CTNNA1P35221 906 aaKnown RBP13.02□□□□□ -0.33
PDPN-210ENST00000513143 SSR1P43307 286 aaKnown RBP13.02□□□□□ -0.33
PDPN-210ENST00000513143 AIF1P55008 147 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 ZXDBP98169 803 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 CBX2Q14781 532 aaPredicted RBP13.02□□□□□ -0.33
PDPN-210ENST00000513143 BOLA3Q53S33 107 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 ZC3H12AQ5D1E8 599 aaKnown RBP13.02□□□□□ -0.33
PDPN-210ENST00000513143 TXNRD3NBQ6F5E7 133 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 NPAS3Q8IXF0 933 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 RHOT1Q8IXI2 618 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 TEKT4Q8WW24 435 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 RNF34Q969K3 372 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 NTAN1Q96AB6 310 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 PLD4Q96BZ4 506 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 C16orf45Q96MC5 204 aaPredicted RBP13.02□□□□□ -0.33
PDPN-210ENST00000513143 ZSWIM3Q96MP5 696 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 NECTIN4Q96NY8 510 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 WDR24Q96S15 920 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 SLITRK6Q9H5Y7 841 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 GKN1Q9NS71 199 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 ARHGEF38Q9NXL2 777 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 GDE1Q9NZC3 331 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 PCSK1NQ9UHG2 260 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 ARHGAP26Q9UNA1 814 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 PCDHA3Q9Y5H8 950 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 CPQQ9Y646 472 aa13.02□□□□□ -0.33
PDPN-210ENST00000513143 CCDC66A2RUB6 948 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 MIF4GDA9UHW6 222 aaKnown RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 H3BQ06 376 aaPredicted RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 KIF2AO00139 706 aaPredicted RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 DDX3YO15523 660 aaKnown RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 STC2O76061 302 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 HMBSP08397 361 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 KRT7P08729 469 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 RARAP10276 462 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 KCNA5P22460 613 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 ADRA1BP35368 520 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 AVPR1AP37288 418 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 PEX5P50542 639 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 SCAPQ12770 1279 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 MTA1Q13330 715 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 SKIV2LQ15477 1246 aaKnown RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 CLUL1Q15846 466 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 ERMARDQ5T6L9 678 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms