RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 HMGB4Q8WW32 186 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 RLN3Q8WXF3 142 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 ERLEC1Q96DZ1 483 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 LOXL4Q96JB6 756 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
CDK7-208ENST00000512687 CRACR2AQ9BSW2 395 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 CD248Q9HCU0 757 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 RXFP3Q9NSD7 469 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 WDR35Q9P2L0 1181 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 FBXO10Q9UK96 956 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 CDV3Q9UKY7 258 aaKnown RBP12.58□□□□□ -0.4
CDK7-208ENST00000512687 KIAA1257Q9ULG3 409 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 CLEC4EQ9ULY5 219 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 CNTN6Q9UQ52 1028 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 STARD13Q9Y3M8 1113 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 PCDH15Q96QU1 1955 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.57□□□□□ -0.4
CDK7-208ENST00000512687 A0A1W2PQF6 199 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 PRR5-ARHGAP8B1AHC4 643 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 GBP1P32455 592 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 MPLP40238 635 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 DGKGP49619 791 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 ARHGAP8P85298 464 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 CETN1Q12798 172 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 PMS2CLQ68D20 193 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 TCEAL6Q6IPX3 200 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 KIAA1211LQ6NV74 962 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 TCEAL3Q969E4 200 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 PLD4Q96BZ4 506 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 IPO9Q96P70 1041 aaKnown RBP12.57□□□□□ -0.4
CDK7-208ENST00000512687 DCLK3Q9C098 648 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 UBE2TQ9NPD8 197 aaPredicted RBP12.57□□□□□ -0.4
CDK7-208ENST00000512687 ACP6Q9NPH0 428 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 CNGB3Q9NQW8 809 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 OLA1Q9NTK5 396 aaKnown RBP12.57□□□□□ -0.4
CDK7-208ENST00000512687 MBD1Q9UIS9 605 aaPredicted RBP12.57□□□□□ -0.4
CDK7-208ENST00000512687 AJAP1Q9UKB5 411 aaPredicted RBP12.57□□□□□ -0.4
CDK7-208ENST00000512687 STRIP2Q9ULQ0 834 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 ZNF510Q9Y2H8 683 aa12.57□□□□□ -0.4
CDK7-208ENST00000512687 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 DCDC2BA2VCK2 349 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 BECN2A8MW95 431 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 GFRA2O00451 464 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 ZNF806P0C7X5 589 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 KRT5P13647 590 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 HOXB2P14652 356 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 GABRG2P18507 467 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 SLC9A1P19634 815 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 NTSR1P30989 418 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 P2RY2P41231 377 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 MFAP3P55082 362 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 STILQ15468 1287 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 ELF2Q15723 593 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 GEN1Q17RS7 908 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 DPCR1Q3MIW9 517 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 PREPLQ4J6C6 727 aaPredicted RBP12.56□□□□□ -0.4
CDK7-208ENST00000512687 USP39Q53GS9 565 aaKnown RBP12.56□□□□□ -0.4
CDK7-208ENST00000512687 MSANTD2Q6P1R3 559 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 DENND1BQ6P3S1 775 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 TRIM65Q6PJ69 517 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 CPXM2Q8N436 756 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 NETO1Q8TDF5 533 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 POLMQ9NP87 494 aaPredicted RBP12.56□□□□□ -0.4
CDK7-208ENST00000512687 CD93Q9NPY3 652 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 CYTH4Q9UIA0 394 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 PCDHGA5Q9Y5G8 931 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 RAD54BQ9Y620 910 aa12.56□□□□□ -0.4
CDK7-208ENST00000512687 ASCC3Q8N3C0 2202 aaKnown RBP12.56□□□□□ -0.4
CDK7-208ENST00000512687 BCLAF3A2AJT9 711 aaKnown RBP12.55□□□□□ -0.4
CDK7-208ENST00000512687 WASH3PC4AMC7 463 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 SLC30A4O14863 429 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 ALDH1A2O94788 518 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 RHOBTB1O94844 696 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 FGFR1OPO95684 399 aaKnown RBP12.55□□□□□ -0.4
CDK7-208ENST00000512687 IGLV3-27P01718 113 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 LTFP02788 710 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 FYNP06241 537 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 HOXD9P28356 352 aaPredicted RBP12.55□□□□□ -0.4
CDK7-208ENST00000512687 CHKAP35790 457 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 GPD2P43304 727 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 RPL34P49207 117 aaKnown RBP12.55□□□□□ -0.4
CDK7-208ENST00000512687 SGSHP51688 502 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 CREB5Q02930 508 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 MAP7D1Q3KQU3 841 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 TRMT11Q7Z4G4 463 aaKnown RBP12.55□□□□□ -0.4
CDK7-208ENST00000512687 CREBRFQ8IUR6 639 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 RNF139Q8WU17 664 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 IRGQQ8WZA9 623 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 PIWIL1Q96J94 861 aaKnown RBP12.55□□□□□ -0.4
CDK7-208ENST00000512687 GABRG3Q99928 467 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 RTKNQ9BST9 563 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 MIS12Q9H081 205 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 SLC6A17Q9H1V8 727 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 SIX2Q9NPC8 291 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 ABCC13Q9NSE7 274 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 CACNA2D2Q9NY47 1150 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 BCCIPQ9P287 314 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDK7-208ENST00000512687 TJP2Q9UDY2 1190 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 SLC27A6Q9Y2P4 619 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 HBS1LQ9Y450 684 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms