RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 PLD4Q96BZ4 506 aa15.4■□□□□ 0.06
CCHCR1-229ENST00000512418 ERLEC1Q96DZ1 483 aa15.4■□□□□ 0.06
CCHCR1-229ENST00000512418 ULBP1Q9BZM6 244 aa15.4■□□□□ 0.06
CCHCR1-229ENST00000512418 LRRC4Q9HBW1 653 aa15.4■□□□□ 0.06
CCHCR1-229ENST00000512418 OLA1Q9NTK5 396 aaKnown RBP15.4■□□□□ 0.06
CCHCR1-229ENST00000512418 ARMCX3Q9UH62 379 aaPredicted RBP15.4■□□□□ 0.06
CCHCR1-229ENST00000512418 HOOK1Q9UJC3 728 aaKnown RBP15.4■□□□□ 0.06
CCHCR1-229ENST00000512418 SLC6A14Q9UN76 642 aa15.4■□□□□ 0.06
CCHCR1-229ENST00000512418 STON1Q9Y6Q2 735 aa15.4■□□□□ 0.06
CCHCR1-229ENST00000512418 ASCC3Q8N3C0 2202 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 TRIM49BA6NDI0 452 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 WASH3PC4AMC7 463 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 TULP2O00295 520 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 SERPINF2P08697 491 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 CD19P15391 556 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 TBXAS1P24557 533 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 ATXN3P54252 364 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 GFPT1Q06210 699 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 STIM1Q13586 685 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 ENPP2Q13822 863 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 EIF4HQ15056 248 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 E2F5Q15329 346 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 BHLHA9Q7RTU4 235 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 ANKS1BQ7Z6G8 1248 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 FAM217AQ8IXS0 508 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 HSPA12BQ96MM6 686 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 IPO9Q96P70 1041 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 SLC2A11Q9BYW1 496 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 SLC6A17Q9H1V8 727 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 CAPN10Q9HC96 672 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 THAP10Q9P2Z0 257 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 CEP295Q9C0D2 2601 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 USP24Q9UPU5 2620 aa15.39■□□□□ 0.05
CCHCR1-229ENST00000512418 O00370 1275 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 PSMA7O14818 248 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 NDUFS2O75306 463 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 SETSIPP0DME0 302 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 VDRP11473 427 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 IL12RB1P42701 662 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 HARS2P49590 506 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 ADIGQ0VDE8 80 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 TRIP4Q15650 581 aaPredicted RBP15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 FUT11Q495W5 492 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 KIAA1324Q6UXG2 1013 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 METTL3Q86U44 580 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 SLC41A1Q8IVJ1 513 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 SIX6OS1Q8N1H7 587 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 TRIML1Q8N9V2 468 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 DEFB124Q8NES8 71 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 DDI1Q8WTU0 396 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 RNF139Q8WU17 664 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 ERCC4Q92889 916 aaPredicted RBP15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 FOXJ1Q92949 421 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 PIWIL1Q96J94 861 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 TIGD1Q96MW7 591 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 GTPBP2Q9BX10 602 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 SLC32A1Q9H598 525 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 KIAA1257Q9ULG3 409 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 HBS1LQ9Y450 684 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 ZFHX4Q86UP3 3567 aa15.38■□□□□ 0.05
CCHCR1-229ENST00000512418 PCDH15Q96QU1 1955 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 UPK3BL1B0FP48 263 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 UPK3BL2E5RIL1 263 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 SYNCRIPO60506 623 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 CD6P30203 668 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 PPP1R2P41236 205 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 FMO5P49326 533 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 ZNF445P59923 1031 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 FOXC1Q12948 553 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 SYCP2LQ5T4T6 812 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 BSPRYQ5W0U4 402 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 FMNL3Q8IVF7 1028 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 SCML4Q8N228 414 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 UBR7Q8N806 425 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 KCTD13Q8WZ19 329 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 NDRG1Q92597 394 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 ZNF419Q96HQ0 510 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 CEP63Q96MT8 703 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 CIPCQ9C0C6 399 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 MKRN2Q9H000 416 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 PRDM16Q9HAZ2 1276 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 CD93Q9NPY3 652 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 FSCN3Q9NQT6 498 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 CNGB3Q9NQW8 809 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 ELOVL2Q9NXB9 296 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 USP36Q9P275 1121 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 SUSD2Q9UGT4 822 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 WASF3Q9UPY6 502 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 FRYQ5TBA9 3013 aa15.37■□□□□ 0.05
CCHCR1-229ENST00000512418 YJEFN3A6XGL0 299 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 E7ENQ6 273 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 ARHGAP33O14559 1287 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 PMM2O15305 246 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 LATS1O95835 1130 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 SYPP08247 313 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 PAEPP09466 180 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 NUCB2P80303 420 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 LRMPQ12912 555 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 SEMA3BQ13214 749 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms