RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 MMRN1Q13201 1228 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 MRNIPQ6NTE8 343 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 MON1BQ7L1V2 547 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 UROC1Q96N76 676 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 EIF2AQ9BY44 585 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 PRDM16Q9HAZ2 1276 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 OLA1Q9NTK5 396 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 NOP53Q9NZM5 478 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 HACD3Q9P035 362 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 CLDN5O00501 218 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 HNRNPCL1O60812 293 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 RAMP2O60895 175 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 PPFIA2O75334 1257 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 RTN3O95197 1032 aaPredicted RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 LMNAP02545 664 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 CHRNB2P17787 502 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 RPL22P35268 128 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 MATKP42679 507 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 EPHB3P54753 998 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 TUSC3Q13454 348 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 TRADDQ15628 312 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 SLC45A4Q5BKX6 768 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 NRDE2Q9H7Z3 1164 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 DYRK4Q9NR20 520 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 PHTF1Q9UMS5 762 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 PCDHGC3Q9UN70 934 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 PTCH2Q9Y6C5 1203 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 LGR5O75473 907 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 ITGAVP06756 1048 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 CNTFP26441 200 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 MPP3Q13368 585 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 FAM83EQ2M2I3 478 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 NUDT18Q6ZVK8 323 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 KIRREL3Q8IZU9 778 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 DCUN1D1Q96GG9 259 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 VAT1Q99536 393 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 DUSP16Q9BY84 665 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 B3GNT5Q9BYG0 378 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 CNGB3Q9NQW8 809 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 LATS2Q9NRM7 1088 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 PADI3Q9ULW8 664 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 MAGEB16A2A368 324 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 LUC7L3O95232 432 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 PYGBP11216 843 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 OXCT1P55809 520 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 CDH17Q12864 832 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 GRIK3Q13003 919 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 TTC23LQ6PF05 361 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 DCLRE1AQ6PJP8 1040 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 NPNTQ6UXI9 565 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 STRA8Q7Z7C7 330 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 DDIASQ8IXT1 998 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 ALLCQ8N6M5 410 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 FNIP1Q8TF40 1166 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 CRYGNQ8WXF5 182 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 ZNF516Q92618 1163 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 MAGEB18Q96M61 343 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 ZNF670Q9BS34 389 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 FAM8A1Q9UBU6 413 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 AFF4Q9UHB7 1163 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 CDY1Q9Y6F8 540 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 RASSF10A6NK89 507 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 OVGP1Q12889 678 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 IMPG1Q17R60 797 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 ZC3H12AQ5D1E8 599 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 TFAP2BQ92481 460 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 LRRC39Q96DD0 335 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 SGF29Q96ES7 293 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 CDK5RAP1Q96SZ6 601 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 FICDQ9BVA6 458 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 STOML1Q9UBI4 398 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 DCDC2Q9UHG0 476 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 PKP3Q9Y446 797 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 XPO1O14980 1071 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 SEPT4O43236 478 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 ERBB2P04626 1255 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 RHOCP08134 193 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 CYP2C18P33260 490 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 BRCC3P46736 316 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 CDK16Q00536 496 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 FSTL1Q12841 308 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 BMPR2Q13873 1038 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 TAF11Q15544 211 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 PPP1R36Q96LQ0 422 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 ERVK-5Q9HDB9 667 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 IARS2Q9NSE4 1012 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 TMEM51Q9NW97 253 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 PIH1D1Q9NWS0 290 aaKnown RBP13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 MARCH2Q9P0N8 246 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 MOSPD1Q9UJG1 213 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 PCDHB12Q9Y5F1 795 aa13.48□□□□□ -0.25
PCDHA4-202ENST00000512229 CYP1A1P04798 512 aaPredicted RBP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 APOA4P06727 396 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 ENO1P06733 434 aaKnown RBP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 OR1E1P30953 314 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 FLT3P36888 993 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms